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AMBER: Assessment of Metagenome BinnERs.
Meyer F, Hofmann P, Belmann P, Garrido-Oter R, Fritz A, Sczyrba A, McHardy AC. Meyer F, et al. Among authors: hofmann p. Gigascience. 2018 Jun 1;7(6):giy069. doi: 10.1093/gigascience/giy069. Gigascience. 2018. PMID: 29893851 Free PMC article.
Critical Assessment of Metagenome Interpretation-a benchmark of metagenomics software.
Sczyrba A, Hofmann P, Belmann P, Koslicki D, Janssen S, Dröge J, Gregor I, Majda S, Fiedler J, Dahms E, Bremges A, Fritz A, Garrido-Oter R, Jørgensen TS, Shapiro N, Blood PD, Gurevich A, Bai Y, Turaev D, DeMaere MZ, Chikhi R, Nagarajan N, Quince C, Meyer F, Balvočiūtė M, Hansen LH, Sørensen SJ, Chia BKH, Denis B, Froula JL, Wang Z, Egan R, Don Kang D, Cook JJ, Deltel C, Beckstette M, Lemaitre C, Peterlongo P, Rizk G, Lavenier D, Wu YW, Singer SW, Jain C, Strous M, Klingenberg H, Meinicke P, Barton MD, Lingner T, Lin HH, Liao YC, Silva GGZ, Cuevas DA, Edwards RA, Saha S, Piro VC, Renard BY, Pop M, Klenk HP, Göker M, Kyrpides NC, Woyke T, Vorholt JA, Schulze-Lefert P, Rubin EM, Darling AE, Rattei T, McHardy AC. Sczyrba A, et al. Among authors: hofmann p. Nat Methods. 2017 Nov;14(11):1063-1071. doi: 10.1038/nmeth.4458. Epub 2017 Oct 2. Nat Methods. 2017. PMID: 28967888 Free PMC article.
CAMISIM: simulating metagenomes and microbial communities.
Fritz A, Hofmann P, Majda S, Dahms E, Dröge J, Fiedler J, Lesker TR, Belmann P, DeMaere MZ, Darling AE, Sczyrba A, Bremges A, McHardy AC. Fritz A, et al. Among authors: hofmann p. Microbiome. 2019 Feb 8;7(1):17. doi: 10.1186/s40168-019-0633-6. Microbiome. 2019. PMID: 30736849 Free PMC article.
Aging-regulated anti-apoptotic long non-coding RNA Sarrah augments recovery from acute myocardial infarction.
Trembinski DJ, Bink DI, Theodorou K, Sommer J, Fischer A, van Bergen A, Kuo CC, Costa IG, Schürmann C, Leisegang MS, Brandes RP, Alekseeva T, Brill B, Wietelmann A, Johnson CN, Spring-Connell A, Kaulich M, Werfel S, Engelhardt S, Hirt MN, Yorgan K, Eschenhagen T, Kirchhof L, Hofmann P, Jaé N, Wittig I, Hamdani N, Bischof C, Krishnan J, Houtkooper RH, Dimmeler S, Boon RA. Trembinski DJ, et al. Among authors: hofmann p. Nat Commun. 2020 Apr 27;11(1):2039. doi: 10.1038/s41467-020-15995-2. Nat Commun. 2020. PMID: 32341350 Free PMC article.
Impact of global cooling on Early Cretaceous high pCO2 world during the Weissert Event.
Cavalheiro L, Wagner T, Steinig S, Bottini C, Dummann W, Esegbue O, Gambacorta G, Giraldo-Gómez V, Farnsworth A, Flögel S, Hofmann P, Lunt DJ, Rethemeyer J, Torricelli S, Erba E. Cavalheiro L, et al. Among authors: hofmann p. Nat Commun. 2021 Sep 13;12(1):5411. doi: 10.1038/s41467-021-25706-0. Nat Commun. 2021. PMID: 34518550 Free PMC article.
Non-coding RNA enhances cardiac development.
Hofmann P, Boon RA. Hofmann P, et al. J Mol Cell Cardiol. 2014 Nov;76:205-7. doi: 10.1016/j.yjmcc.2014.09.005. Epub 2014 Sep 18. J Mol Cell Cardiol. 2014. PMID: 25240640 No abstract available.
Long Noncoding RNA MANTIS Facilitates Endothelial Angiogenic Function.
Leisegang MS, Fork C, Josipovic I, Richter FM, Preussner J, Hu J, Miller MJ, Epah J, Hofmann P, Günther S, Moll F, Valasarajan C, Heidler J, Ponomareva Y, Freiman TM, Maegdefessel L, Plate KH, Mittelbronn M, Uchida S, Künne C, Stellos K, Schermuly RT, Weissmann N, Devraj K, Wittig I, Boon RA, Dimmeler S, Pullamsetti SS, Looso M, Miller FJ Jr, Brandes RP. Leisegang MS, et al. Among authors: hofmann p. Circulation. 2017 Jul 4;136(1):65-79. doi: 10.1161/CIRCULATIONAHA.116.026991. Epub 2017 Mar 28. Circulation. 2017. PMID: 28351900 Free PMC article.
725 results