Nguyen SH - Search Results

1

Retooling phage display with electrohydrodynamic nanomixing and nanopore sequencing.

Raftery LJ, Howard CB, Grewal YS, Vaidyanathan R, Jones ML, Anderson W, Korbie D, Duarte T, Cao MD, Nguyen SH, Coin LJM, Mahler SM, Trau M. Raftery LJ, et al. Among authors: nguyen sh. Lab Chip. 2019 Dec 21;19(24):4083-4092. doi: 10.1039/c9lc00978g. Epub 2019 Nov 12. Lab Chip. 2019. PMID: 31712799

2

Scaffolding and completing genome assemblies in real-time with nanopore sequencing.

Cao MD, Nguyen SH, Ganesamoorthy D, Elliott AG, Cooper MA, Coin LJ. Cao MD, et al. Among authors: nguyen sh. Nat Commun. 2017 Feb 20;8:14515. doi: 10.1038/ncomms14515. Nat Commun. 2017. PMID: 28218240 Free PMC article.

3

Real-time demultiplexing Nanopore barcoded sequencing data with npBarcode.

Nguyen SH, Duarte TPS, Coin LJM, Cao MD. Nguyen SH, et al. Bioinformatics. 2017 Dec 15;33(24):3988-3990. doi: 10.1093/bioinformatics/btx537. Bioinformatics. 2017. PMID: 28961965

4

Non-antibiotic antimicrobial triclosan induces multiple antibiotic resistance through genetic mutation.

Lu J, Jin M, Nguyen SH, Mao L, Li J, Coin LJM, Yuan Z, Guo J. Lu J, et al. Among authors: nguyen sh. Environ Int. 2018 Sep;118:257-265. doi: 10.1016/j.envint.2018.06.004. Epub 2018 Jun 11. Environ Int. 2018. PMID: 29902774

5

Triclosan at environmentally relevant concentrations promotes horizontal transfer of multidrug resistance genes within and across bacterial genera.

Lu J, Wang Y, Li J, Mao L, Nguyen SH, Duarte T, Coin L, Bond P, Yuan Z, Guo J. Lu J, et al. Among authors: nguyen sh. Environ Int. 2018 Dec;121(Pt 2):1217-1226. doi: 10.1016/j.envint.2018.10.040. Epub 2018 Oct 30. Environ Int. 2018. PMID: 30389380 Free article.

6

Rapid diagnosis of Capnocytophaga canimorsus septic shock in an immunocompetent individual using real-time Nanopore sequencing: a case report.

Bialasiewicz S, Duarte TPS, Nguyen SH, Sukumaran V, Stewart A, Appleton S, Pitt ME, Bainomugisa A, Jennison AV, Graham R, Coin LJM, Hajkowicz K. Bialasiewicz S, et al. Among authors: nguyen sh. BMC Infect Dis. 2019 Jul 24;19(1):660. doi: 10.1186/s12879-019-4173-2. BMC Infect Dis. 2019. PMID: 31340776 Free PMC article.

7

Evaluating the genome and resistome of extensively drug-resistant Klebsiella pneumoniae using native DNA and RNA Nanopore sequencing.

Pitt ME, Nguyen SH, Duarte TPS, Teng H, Blaskovich MAT, Cooper MA, Coin LJM. Pitt ME, et al. Among authors: nguyen sh. Gigascience. 2020 Feb 1;9(2):giaa002. doi: 10.1093/gigascience/giaa002. Gigascience. 2020. PMID: 32016399 Free PMC article.

8

Complete Genome Sequences of Clinical Pandoraea fibrosis Isolates.

Pitt ME, Nguyen SH, Duarte TPS, Roddam LF, Blaskovich MAT, Cooper MA, Coin LJM. Pitt ME, et al. Among authors: nguyen sh. Microbiol Resour Announc. 2020 Mar 26;9(13):e00060-20. doi: 10.1128/MRA.00060-20. Microbiol Resour Announc. 2020. PMID: 32217674 Free PMC article.

9

Nanopore sequencing as a scalable, cost-effective platform for analyzing polyclonal vector integration sites following clinical T cell therapy.

Zhang P, Ganesamoorthy D, Nguyen SH, Au R, Coin LJ, Tey SK. Zhang P, et al. Among authors: nguyen sh. J Immunother Cancer. 2020 Jun;8(1):e000299. doi: 10.1136/jitc-2019-000299. J Immunother Cancer. 2020. PMID: 32527930 Free PMC article.

10

Real-time resolution of short-read assembly graph using ONT long reads.

Nguyen SH, Cao MD, Coin LJM. Nguyen SH, et al. PLoS Comput Biol. 2021 Jan 20;17(1):e1008586. doi: 10.1371/journal.pcbi.1008586. eCollection 2021 Jan. PLoS Comput Biol. 2021. PMID: 33471816 Free PMC article.

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