Budde MW - Search Results

1

In situ readout of DNA barcodes and single base edits facilitated by in vitro transcription.

Askary A, Sanchez-Guardado L, Linton JM, Chadly DM, Budde MW, Cai L, Lois C, Elowitz MB. Askary A, et al. Among authors: budde mw. Nat Biotechnol. 2020 Jan;38(1):66-75. doi: 10.1038/s41587-019-0299-4. Epub 2019 Nov 18. Nat Biotechnol. 2020. PMID: 31740838 Free PMC article.

2

Synthetic recording and in situ readout of lineage information in single cells.

Frieda KL, Linton JM, Hormoz S, Choi J, Chow KK, Singer ZS, Budde MW, Elowitz MB, Cai L. Frieda KL, et al. Among authors: budde mw. Nature. 2017 Jan 5;541(7635):107-111. doi: 10.1038/nature20777. Epub 2016 Nov 21. Nature. 2017. PMID: 27869821 Free PMC article.

3

Publisher Correction: In situ readout of DNA barcodes and single base edits facilitated by in vitro transcription.

Askary A, Sanchez-Guardado L, Linton JM, Chadly DM, Budde MW, Cai L, Lois C, Elowitz MB. Askary A, et al. Among authors: budde mw. Nat Biotechnol. 2020 Feb;38(2):245. doi: 10.1038/s41587-020-0432-4. Nat Biotechnol. 2020. PMID: 31988471

4

Imaging cell lineage with a synthetic digital recording system.

Chow KK, Budde MW, Granados AA, Cabrera M, Yoon S, Cho S, Huang TH, Koulena N, Frieda KL, Cai L, Lois C, Elowitz MB. Chow KK, et al. Among authors: budde mw. Science. 2021 Apr 9;372(6538):eabb3099. doi: 10.1126/science.abb3099. Science. 2021. PMID: 33833095

5

Synthetic mammalian signaling circuits for robust cell population control.

Ma Y, Budde MW, Mayalu MN, Zhu J, Lu AC, Murray RM, Elowitz MB. Ma Y, et al. Among authors: budde mw. Cell. 2022 Mar 17;185(6):967-979.e12. doi: 10.1016/j.cell.2022.01.026. Epub 2022 Mar 1. Cell. 2022. PMID: 35235768 Free PMC article.

6

Tuning Methylation-Dependent Silencing Dynamics by Synthetic Modulation of CpG Density.

Ma Y, Budde MW, Zhu J, Elowitz MB. Ma Y, et al. Among authors: budde mw. ACS Synth Biol. 2023 Sep 15;12(9):2536-2545. doi: 10.1021/acssynbio.3c00078. Epub 2023 Aug 12. ACS Synth Biol. 2023. PMID: 37572041 Free PMC article.

7

Pydna: a simulation and documentation tool for DNA assembly strategies using python.

Pereira F, Azevedo F, Carvalho Â, Ribeiro GF, Budde MW, Johansson B. Pereira F, et al. Among authors: budde mw. BMC Bioinformatics. 2015 May 2;16(1):142. doi: 10.1186/s12859-015-0544-x. BMC Bioinformatics. 2015. PMID: 25933606 Free PMC article.

8

Observation of quantum shock waves created with ultra- compressed slow light pulses in a Bose-Einstein condensate.

Dutton Z, Budde M, Slowe C, Hau LV. Dutton Z, et al. Science. 2001 Jul 27;293(5530):663-8. doi: 10.1126/science.1062527. Epub 2001 Jun 28. Science. 2001. PMID: 11431534

9

Tuning methylation-dependent silencing dynamics by synthetic modulation of CpG density.

Ma Y, Budde MW, Zhu J, Elowitz MB. Ma Y, et al. Among authors: budde mw. bioRxiv [Preprint]. 2023 Jun 1:2023.05.30.542205. doi: 10.1101/2023.05.30.542205. bioRxiv. 2023. Update in: ACS Synth Biol. 2023 Sep 15;12(9):2536-2545. doi: 10.1021/acssynbio.3c00078. PMID: 37398290 Free PMC article. Updated. Preprint.

10

HIF-1 and SKN-1 coordinate the transcriptional response to hydrogen sulfide in Caenorhabditis elegans.

Miller DL, Budde MW, Roth MB. Miller DL, et al. Among authors: budde mw. PLoS One. 2011;6(9):e25476. doi: 10.1371/journal.pone.0025476. Epub 2011 Sep 29. PLoS One. 2011. PMID: 21980473 Free PMC article.

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