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Nanoscale chromatin imaging and analysis platform bridges 4D chromatin organization with molecular function.
Li Y, Eshein A, Virk RKA, Eid A, Wu W, Frederick J, VanDerway D, Gladstein S, Huang K, Shim AR, Anthony NM, Bauer GM, Zhou X, Agrawal V, Pujadas EM, Jain S, Esteve G, Chandler JE, Nguyen TQ, Bleher R, de Pablo JJ, Szleifer I, Dravid VP, Almassalha LM, Backman V. Li Y, et al. Among authors: agrawal v. Sci Adv. 2021 Jan 1;7(1):eabe4310. doi: 10.1126/sciadv.abe4310. Print 2021 Jan. Sci Adv. 2021. PMID: 33523864 Free PMC article.
Physical and data structure of 3D genome.
Huang K, Li Y, Shim AR, Virk RKA, Agrawal V, Eshein A, Nap RJ, Almassalha LM, Backman V, Szleifer I. Huang K, et al. Among authors: agrawal v. Sci Adv. 2020 Jan 10;6(2):eaay4055. doi: 10.1126/sciadv.aay4055. eCollection 2020 Jan. Sci Adv. 2020. PMID: 31950084 Free PMC article.
Early Upper Aerodigestive Tract Cancer Detection Using Electron Microscopy to Reveal Chromatin Packing Alterations in Buccal Mucosa Cells.
Bugter O, Li Y, Wolters AHG, Agrawal V, Dravid A, Chang A, Hardillo J, Giepmans BNG, Baatenburg de Jong RJ, Amelink A, Backman V, Robinson DJ. Bugter O, et al. Among authors: agrawal v. Microsc Microanal. 2021 Aug;27(4):878-888. doi: 10.1017/S1431927621000507. Microsc Microanal. 2021. PMID: 34108070 Free PMC article.
Author Correction: Analysis of three-dimensional chromatin packing domains by chromatin scanning transmission electron microscopy (ChromSTEM).
Li Y, Agrawal V, Virk RKA, Roth E, Li WS, Eshein A, Frederick J, Huang K, Almassalha L, Bleher R, Carignano MA, Szleifer I, Dravid VP, Backman V. Li Y, et al. Among authors: agrawal v. Sci Rep. 2022 Jul 26;12(1):12720. doi: 10.1038/s41598-022-17293-x. Sci Rep. 2022. PMID: 35882912 Free PMC article. No abstract available.
Chromatin reprogramming and bone regeneration in vitro and in vivo via the microtopography-induced constriction of cell nuclei.
Wang X, Agrawal V, Dunton CL, Liu Y, Virk RKA, Patel PA, Carter L, Pujadas EM, Li Y, Jain S, Wang H, Ni N, Tsai HM, Rivera-Bolanos N, Frederick J, Roth E, Bleher R, Duan C, Ntziachristos P, He TC, Reid RR, Jiang B, Subramanian H, Backman V, Ameer GA. Wang X, et al. Among authors: agrawal v. Nat Biomed Eng. 2023 Nov;7(11):1514-1529. doi: 10.1038/s41551-023-01053-x. Epub 2023 Jun 12. Nat Biomed Eng. 2023. PMID: 37308586 Free PMC article.
Depletion of lamins B1 and B2 alters chromatin mobility and induces differential gene expression by a mesoscale-motion dependent mechanism.
Pujadas EM, Wei X, Acosta N, Carter L, Yang J, Almassalha L, Daneshkhah A, Rao SSP, Agrawal V, Seker-Polat F, Aiden EL, Kanemaki MT, Backman V, Adli M. Pujadas EM, et al. Among authors: agrawal v. bioRxiv [Preprint]. 2023 Jun 26:2023.06.26.546573. doi: 10.1101/2023.06.26.546573. bioRxiv. 2023. Update in: Genome Biol. 2024 Mar 22;25(1):77. doi: 10.1186/s13059-024-03212-y. PMID: 37425796 Free PMC article. Updated. Preprint.
1,125 results