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Specific allelic discrimination of N501Y and other SARS-CoV-2 mutations by ddPCR detects B.1.1.7 lineage in Washington State.
Perchetti GA, Zhu H, Mills MG, Shrestha L, Wagner C, Bakhash SM, Lin MJ, Xie H, Huang ML, Mathias P, Bedford T, Jerome KR, Greninger AL, Roychoudhury P. Perchetti GA, et al. Among authors: roychoudhury p. J Med Virol. 2021 Oct;93(10):5931-5941. doi: 10.1002/jmv.27155. Epub 2021 Jul 3. J Med Virol. 2021. PMID: 34170525 Free PMC article.
Digital detection of endonuclease mediated gene disruption in the HIV provirus.
Sedlak RH, Liang S, Niyonzima N, De Silva Feelixge HS, Roychoudhury P, Greninger AL, Weber ND, Boissel S, Scharenberg AM, Cheng A, Magaret A, Bumgarner R, Stone D, Jerome KR. Sedlak RH, et al. Among authors: roychoudhury p. Sci Rep. 2016 Feb 2;6:20064. doi: 10.1038/srep20064. Sci Rep. 2016. PMID: 26829887 Free PMC article.
In vivo disruption of latent HSV by designer endonuclease therapy.
Aubert M, Madden EA, Loprieno M, DeSilva Feelixge HS, Stensland L, Huang ML, Greninger AL, Roychoudhury P, Niyonzima N, Nguyen T, Magaret A, Galleto R, Stone D, Jerome KR. Aubert M, et al. Among authors: roychoudhury p. JCI Insight. 2016 Sep 8;1(14):e88468. doi: 10.1172/jci.insight.88468. JCI Insight. 2016. PMID: 27642635 Free PMC article.
Highly conserved intragenic HSV-2 sequences: Results from next-generation sequencing of HSV-2 UL and US regions from genital swabs collected from 3 continents.
Johnston C, Magaret A, Roychoudhury P, Greninger AL, Cheng A, Diem K, Fitzgibbon MP, Huang ML, Selke S, Lingappa JR, Celum C, Jerome KR, Wald A, Koelle DM. Johnston C, et al. Among authors: roychoudhury p. Virology. 2017 Oct;510:90-98. doi: 10.1016/j.virol.2017.06.031. Epub 2017 Jul 13. Virology. 2017. PMID: 28711653 Free PMC article.
Tuning DNA binding affinity and cleavage specificity of an engineered gene-targeting nuclease via surface display, flow cytometry and cellular analyses.
Niyonzima N, Lambert AR, Werther R, De Silva Feelixge H, Roychoudhury P, Greninger AL, Stone D, Stoddard BL, Jerome KR. Niyonzima N, et al. Among authors: roychoudhury p. Protein Eng Des Sel. 2017 Jul 1;30(7):503-522. doi: 10.1093/protein/gzx037. Protein Eng Des Sel. 2017. PMID: 28873986 Free PMC article.
Dual-strain genital herpes simplex virus type 2 (HSV-2) infection in the US, Peru, and 8 countries in sub-Saharan Africa: A nested cross-sectional viral genotyping study.
Johnston C, Magaret A, Roychoudhury P, Greninger AL, Reeves D, Schiffer J, Jerome KR, Sather C, Diem K, Lingappa JR, Celum C, Koelle DM, Wald A. Johnston C, et al. Among authors: roychoudhury p. PLoS Med. 2017 Dec 27;14(12):e1002475. doi: 10.1371/journal.pmed.1002475. eCollection 2017 Dec. PLoS Med. 2017. PMID: 29281620 Free PMC article.
230 results