Liu T - Search Results

1

CellCall: integrating paired ligand-receptor and transcription factor activities for cell-cell communication.

Zhang Y, Liu T, Hu X, Wang M, Wang J, Zou B, Tan P, Cui T, Dou Y, Ning L, Huang Y, Rao S, Wang D, Zhao X. Zhang Y, et al. Among authors: liu t. Nucleic Acids Res. 2021 Sep 7;49(15):8520-8534. doi: 10.1093/nar/gkab638. Nucleic Acids Res. 2021. PMID: 34331449 Free PMC article.

2

RIscoper: a tool for RNA-RNA interaction extraction from the literature.

Zhang Y, Liu T, Chen L, Yang J, Yin J, Zhang Y, Yun Z, Xu H, Ning L, Guo F, Jiang Y, Lin H, Wang D, Huang Y, Huang J. Zhang Y, et al. Among authors: liu t. Bioinformatics. 2019 Sep 1;35(17):3199-3202. doi: 10.1093/bioinformatics/btz044. Bioinformatics. 2019. PMID: 30668649

3

Exploration of invasive mechanisms via global ncRNA-associated virus-host crosstalk.

Liu TY, Zhang YC, Lin YQ, Hu YF, Zhang Y, Wang D, Wang Y, Ning L. Liu TY, et al. Genomics. 2020 Mar;112(2):1643-1650. doi: 10.1016/j.ygeno.2019.10.002. Epub 2019 Oct 15. Genomics. 2020. PMID: 31626899 Free article.

4

RNAInter in 2020: RNA interactome repository with increased coverage and annotation.

Lin Y, Liu T, Cui T, Wang Z, Zhang Y, Tan P, Huang Y, Yu J, Wang D. Lin Y, et al. Among authors: liu t. Nucleic Acids Res. 2020 Jan 8;48(D1):D189-D197. doi: 10.1093/nar/gkz804. Nucleic Acids Res. 2020. PMID: 31906603 Free PMC article.

5

cncRNAdb: a manually curated resource of experimentally supported RNAs with both protein-coding and noncoding function.

Huang Y, Wang J, Zhao Y, Wang H, Liu T, Li Y, Cui T, Li W, Feng Y, Luo J, Gong J, Ning L, Zhang Y, Wang D, Zhang Y. Huang Y, et al. Among authors: liu t. Nucleic Acids Res. 2021 Jan 8;49(D1):D65-D70. doi: 10.1093/nar/gkaa791. Nucleic Acids Res. 2021. PMID: 33010163 Free PMC article.

6

Cellinker: a platform of ligand-receptor interactions for intercellular communication analysis.

Zhang Y, Liu T, Wang J, Zou B, Li L, Yao L, Chen K, Ning L, Wu B, Zhao X, Wang D. Zhang Y, et al. Among authors: liu t. Bioinformatics. 2021 Jan 20:btab036. doi: 10.1093/bioinformatics/btab036. Online ahead of print. Bioinformatics. 2021. PMID: 33471060 Free PMC article.

7

RNALocate v2.0: an updated resource for RNA subcellular localization with increased coverage and annotation.

Cui T, Dou Y, Tan P, Ni Z, Liu T, Wang D, Huang Y, Cai K, Zhao X, Xu D, Lin H, Wang D. Cui T, et al. Among authors: liu t. Nucleic Acids Res. 2022 Jan 7;50(D1):D333-D339. doi: 10.1093/nar/gkab825. Nucleic Acids Res. 2022. PMID: 34551440 Free PMC article.

8

Targeting APLN/APJ restores blood-testis barrier and improves spermatogenesis in murine and human diabetic models.

Song K, Yang X, An G, Xia X, Zhao J, Xu X, Wan C, Liu T, Zheng Y, Ren S, Wang M, Chang G, Cronin SJF, Penninger JM, Jing T, Ou X, Rao S, Liu Z, Zhao XY. Song K, et al. Among authors: liu z, liu t. Nat Commun. 2022 Nov 28;13(1):7335. doi: 10.1038/s41467-022-34990-3. Nat Commun. 2022. PMID: 36443325 Free PMC article.

9

LncReader: identification of dual functional long noncoding RNAs using a multi-head self-attention mechanism.

Liu T, Zou B, He M, Hu Y, Dou Y, Cui T, Tan P, Li S, Rao S, Huang Y, Liu S, Cai K, Wang D. Liu T, et al. Among authors: liu s. Brief Bioinform. 2023 Jan 19;24(1):bbac579. doi: 10.1093/bib/bbac579. Brief Bioinform. 2023. PMID: 36575567

10

Attention is all you need: utilizing attention in AI-enabled drug discovery.

Zhang Y, Liu C, Liu M, Liu T, Lin H, Huang CB, Ning L. Zhang Y, et al. Among authors: liu m, liu c, liu t. Brief Bioinform. 2023 Nov 22;25(1):bbad467. doi: 10.1093/bib/bbad467. Brief Bioinform. 2023. PMID: 38189543 Free PMC article. Review.

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