Holmes EC - Search Results

1

Assignment of epidemiological lineages in an emerging pandemic using the pangolin tool.

O'Toole Á, Scher E, Underwood A, Jackson B, Hill V, McCrone JT, Colquhoun R, Ruis C, Abu-Dahab K, Taylor B, Yeats C, du Plessis L, Maloney D, Medd N, Attwood SW, Aanensen DM, Holmes EC, Pybus OG, Rambaut A. O'Toole Á, et al. Among authors: holmes ec. Virus Evol. 2021 Jul 30;7(2):veab064. doi: 10.1093/ve/veab064. eCollection 2021. Virus Evol. 2021. PMID: 34527285 Free PMC article.

2

Inferring population history from molecular phylogenies.

Nee S, Holmes EC, Rambaut A, Harvey PH. Nee S, et al. Among authors: holmes ec. Philos Trans R Soc Lond B Biol Sci. 1995 Jul 29;349(1327):25-31. doi: 10.1098/rstb.1995.0087. Philos Trans R Soc Lond B Biol Sci. 1995. PMID: 8748016

3

Revealing the history of infectious disease epidemics through phylogenetic trees.

Holmes EC, Nee S, Rambaut A, Garnett GP, Harvey PH. Holmes EC, et al. Philos Trans R Soc Lond B Biol Sci. 1995 Jul 29;349(1327):33-40. doi: 10.1098/rstb.1995.0088. Philos Trans R Soc Lond B Biol Sci. 1995. PMID: 8748017

4

Recombination between sequences of hepatitis B virus from different genotypes.

Bollyky PL, Rambaut A, Harvey PH, Holmes EC. Bollyky PL, et al. Among authors: holmes ec. J Mol Evol. 1996 Feb;42(2):97-102. doi: 10.1007/BF02198834. J Mol Evol. 1996. PMID: 8919861

5

Phylogenetic evidence for recombination in dengue virus.

Holmes EC, Worobey M, Rambaut A. Holmes EC, et al. Mol Biol Evol. 1999 Mar;16(3):405-9. doi: 10.1093/oxfordjournals.molbev.a026121. Mol Biol Evol. 1999. PMID: 10331266

6

Widespread intra-serotype recombination in natural populations of dengue virus.

Worobey M, Rambaut A, Holmes EC. Worobey M, et al. Among authors: holmes ec. Proc Natl Acad Sci U S A. 1999 Jun 22;96(13):7352-7. doi: 10.1073/pnas.96.13.7352. Proc Natl Acad Sci U S A. 1999. PMID: 10377418 Free PMC article.

7

The mid-depth method and HIV-1: a practical approach for testing hypotheses of viral epidemic history.

Pybus OG, Holmes EC, Harvey PH. Pybus OG, et al. Among authors: holmes ec. Mol Biol Evol. 1999 Jul;16(7):953-9. doi: 10.1093/oxfordjournals.molbev.a026184. Mol Biol Evol. 1999. PMID: 10406112

8

Human immunodeficiency virus. Phylogeny and the origin of HIV-1.

Rambaut A, Robertson DL, Pybus OG, Peeters M, Holmes EC. Rambaut A, et al. Among authors: holmes ec. Nature. 2001 Apr 26;410(6832):1047-8. doi: 10.1038/35074179. Nature. 2001. PMID: 11323659 No abstract available.

9

The epidemic behavior of the hepatitis C virus.

Pybus OG, Charleston MA, Gupta S, Rambaut A, Holmes EC, Harvey PH. Pybus OG, et al. Among authors: holmes ec. Science. 2001 Jun 22;292(5525):2323-5. doi: 10.1126/science.1058321. Science. 2001. PMID: 11423661

10

Rates of molecular evolution in RNA viruses: a quantitative phylogenetic analysis.

Jenkins GM, Rambaut A, Pybus OG, Holmes EC. Jenkins GM, et al. Among authors: holmes ec. J Mol Evol. 2002 Feb;54(2):156-65. doi: 10.1007/s00239-001-0064-3. J Mol Evol. 2002. PMID: 11821909

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