Ren B - Search Results

1

Sequence logic at enhancers governs a dual mechanism of endodermal organ fate induction by FOXA pioneer factors.

Geusz RJ, Wang A, Lam DK, Vinckier NK, Alysandratos KD, Roberts DA, Wang J, Kefalopoulou S, Ramirez A, Qiu Y, Chiou J, Gaulton KJ, Ren B, Kotton DN, Sander M. Geusz RJ, et al. Among authors: ren b. Nat Commun. 2021 Nov 17;12(1):6636. doi: 10.1038/s41467-021-26950-0. Nat Commun. 2021. PMID: 34789735 Free PMC article.

2

Genome-wide mapping of allele-specific protein-DNA interactions in human cells.

Maynard ND, Chen J, Stuart RK, Fan JB, Ren B. Maynard ND, et al. Among authors: ren b. Nat Methods. 2008 Apr;5(4):307-9. doi: 10.1038/nmeth.1194. Epub 2008 Mar 16. Nat Methods. 2008. PMID: 18345007

3

Histone modifications at human enhancers reflect global cell-type-specific gene expression.

Heintzman ND, Hon GC, Hawkins RD, Kheradpour P, Stark A, Harp LF, Ye Z, Lee LK, Stuart RK, Ching CW, Ching KA, Antosiewicz-Bourget JE, Liu H, Zhang X, Green RD, Lobanenkov VV, Stewart R, Thomson JA, Crawford GE, Kellis M, Ren B. Heintzman ND, et al. Among authors: ren b. Nature. 2009 May 7;459(7243):108-12. doi: 10.1038/nature07829. Epub 2009 Mar 18. Nature. 2009. PMID: 19295514 Free PMC article.

4

Human DNA methylomes at base resolution show widespread epigenomic differences.

Lister R, Pelizzola M, Dowen RH, Hawkins RD, Hon G, Tonti-Filippini J, Nery JR, Lee L, Ye Z, Ngo QM, Edsall L, Antosiewicz-Bourget J, Stewart R, Ruotti V, Millar AH, Thomson JA, Ren B, Ecker JR. Lister R, et al. Among authors: ren b. Nature. 2009 Nov 19;462(7271):315-22. doi: 10.1038/nature08514. Epub 2009 Oct 14. Nature. 2009. PMID: 19829295 Free PMC article.

5

9p21 DNA variants associated with coronary artery disease impair interferon-γ signalling response.

Harismendy O, Notani D, Song X, Rahim NG, Tanasa B, Heintzman N, Ren B, Fu XD, Topol EJ, Rosenfeld MG, Frazer KA. Harismendy O, et al. Among authors: ren b. Nature. 2011 Feb 10;470(7333):264-8. doi: 10.1038/nature09753. Nature. 2011. PMID: 21307941 Free PMC article.

6

PU.1 and C/EBP(alpha) synergistically program distinct response to NF-kappaB activation through establishing monocyte specific enhancers.

Jin F, Li Y, Ren B, Natarajan R. Jin F, et al. Among authors: ren b. Proc Natl Acad Sci U S A. 2011 Mar 29;108(13):5290-5. doi: 10.1073/pnas.1017214108. Epub 2011 Mar 14. Proc Natl Acad Sci U S A. 2011. PMID: 21402921 Free PMC article.

7

Enhancers: multi-dimensional signal integrators.

Jin F, Li Y, Ren B, Natarajan R. Jin F, et al. Among authors: ren b. Transcription. 2011 Sep-Oct;2(5):226-30. doi: 10.4161/trns.2.5.17712. Transcription. 2011. PMID: 22231119 Free PMC article. Review.

8

Topological domains in mammalian genomes identified by analysis of chromatin interactions.

Dixon JR, Selvaraj S, Yue F, Kim A, Li Y, Shen Y, Hu M, Liu JS, Ren B. Dixon JR, et al. Among authors: ren b. Nature. 2012 Apr 11;485(7398):376-80. doi: 10.1038/nature11082. Nature. 2012. PMID: 22495300 Free PMC article.

9

A map of the cis-regulatory sequences in the mouse genome.

Shen Y, Yue F, McCleary DF, Ye Z, Edsall L, Kuan S, Wagner U, Dixon J, Lee L, Lobanenkov VV, Ren B. Shen Y, et al. Among authors: ren b. Nature. 2012 Aug 2;488(7409):116-20. doi: 10.1038/nature11243. Nature. 2012. PMID: 22763441 Free PMC article.

10

Epigenetic memory at embryonic enhancers identified in DNA methylation maps from adult mouse tissues.

Hon GC, Rajagopal N, Shen Y, McCleary DF, Yue F, Dang MD, Ren B. Hon GC, et al. Among authors: ren b. Nat Genet. 2013 Oct;45(10):1198-206. doi: 10.1038/ng.2746. Epub 2013 Sep 1. Nat Genet. 2013. PMID: 23995138 Free PMC article.

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