Nicoli A - Search Results

1

Classification Model for the Second Extracellular Loop of Class A GPCRs.

Nicoli A, Dunkel A, Giorgino T, de Graaf C, Di Pizio A. Nicoli A, et al. J Chem Inf Model. 2022 Feb 14;62(3):511-522. doi: 10.1021/acs.jcim.1c01056. Epub 2022 Feb 3. J Chem Inf Model. 2022. PMID: 35113559 Free article.

2

In Silico Molecular Study of Tryptophan Bitterness.

Di Pizio A, Nicoli A. Di Pizio A, et al. Among authors: nicoli a. Molecules. 2020 Oct 11;25(20):4623. doi: 10.3390/molecules25204623. Molecules. 2020. PMID: 33050648 Free PMC article.

3

Protein-protein interactions at a glance: Protocols for the visualization of biomolecular interactions.

Agamennone M, Nicoli A, Bayer S, Weber V, Borro L, Gupta S, Fantacuzzi M, Di Pizio A. Agamennone M, et al. Among authors: nicoli a. Methods Cell Biol. 2021;166:271-307. doi: 10.1016/bs.mcb.2021.06.012. Epub 2021 Jul 31. Methods Cell Biol. 2021. PMID: 34752337

4

Modeling the Orthosteric Binding Site of the G Protein-Coupled Odorant Receptor OR5K1.

Nicoli A, Haag F, Marcinek P, He R, Kreißl J, Stein J, Marchetto A, Dunkel A, Hofmann T, Krautwurst D, Di Pizio A. Nicoli A, et al. J Chem Inf Model. 2023 Apr 10;63(7):2014-2029. doi: 10.1021/acs.jcim.2c00752. Epub 2023 Jan 25. J Chem Inf Model. 2023. PMID: 36696962 Free PMC article.

5

Structure-Based Discovery of Mouse Trace Amine-Associated Receptor 5 Antagonists.

Nicoli A, Weber V, Bon C, Steuer A, Gustincich S, Gainetdinov RR, Lang R, Espinoza S, Di Pizio A. Nicoli A, et al. J Chem Inf Model. 2023 Nov 13;63(21):6667-6680. doi: 10.1021/acs.jcim.3c00755. Epub 2023 Oct 17. J Chem Inf Model. 2023. PMID: 37847527 Free PMC article.

6

The dark sides of the GPCR tree - research progress on understudied GPCRs.

Scharf MM, Humphrys LJ, Berndt S, Di Pizio A, Lehmann J, Liebscher I, Nicoli A, Niv MY, Peri L, Schihada H, Schulte G. Scharf MM, et al. Among authors: nicoli a. Br J Pharmacol. 2024 Feb 10. doi: 10.1111/bph.16325. Online ahead of print. Br J Pharmacol. 2024. PMID: 38339984 Review.

7

The path to the G protein-coupled receptor structural landscape: Major milestones and future directions.

Kogut-Günthel MM, Zara Z, Nicoli A, Steuer A, Lopez-Balastegui M, Selent J, Karanth S, Koehler M, Ciancetta A, Abiko LA, Hagn F, Di Pizio A. Kogut-Günthel MM, et al. Among authors: nicoli a. Br J Pharmacol. 2024 Aug 29. doi: 10.1111/bph.17314. Online ahead of print. Br J Pharmacol. 2024. PMID: 39209310 Review.

8

Viral capsid structural assembly governs the reovirus binding interface to NgR1.

Dos Santos Natividade R, Dumitru AC, Nicoli A, Strebl M, Sutherland DM, Welsh OL, Ghulam M, Stehle T, Dermody TS, Di Pizio A, Koehler M, Alsteens D. Dos Santos Natividade R, et al. Among authors: nicoli a. Nanoscale Horiz. 2024 Oct 21;9(11):1925-1937. doi: 10.1039/d4nh00315b. Nanoscale Horiz. 2024. PMID: 39347978 Free PMC article.

9

Bitter peptide prediction using graph neural networks.

Srivastava P, Steuer A, Ferri F, Nicoli A, Schultz K, Bej S, Di Pizio A, Wolkenhauer O. Srivastava P, et al. Among authors: nicoli a. J Cheminform. 2024 Oct 7;16(1):111. doi: 10.1186/s13321-024-00909-x. J Cheminform. 2024. PMID: 39375808 Free PMC article.

10

Phylogenetic and Mutation Analysis of the Venezuelan Equine Encephalitis Virus Sequence Isolated in Costa Rica from a Mare with Encephalitis.

León B, González G, Nicoli A, Rojas A, Pizio AD, Ramirez-Carvajal L, Jimenez C. León B, et al. Among authors: nicoli a. Vet Sci. 2022 May 28;9(6):258. doi: 10.3390/vetsci9060258. Vet Sci. 2022. PMID: 35737310 Free PMC article.

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