Saddiki H - Search Results

1

Assessing Differential Variability of High-Throughput DNA Methylation Data.

Saddiki H, Colicino E, Lesseur C. Saddiki H, et al. Curr Environ Health Rep. 2022 Dec;9(4):625-630. doi: 10.1007/s40572-022-00374-4. Epub 2022 Aug 30. Curr Environ Health Rep. 2022. PMID: 36040576 Review.

2

Sperm DNA methylation mediates the association of male age on reproductive outcomes among couples undergoing infertility treatment.

Oluwayiose OA, Wu H, Saddiki H, Whitcomb BW, Balzer LB, Brandon N, Suvorov A, Tayyab R, Sites CK, Hill L, Marcho C, Pilsner JR. Oluwayiose OA, et al. Among authors: saddiki h. Sci Rep. 2021 Feb 5;11(1):3216. doi: 10.1038/s41598-020-80857-2. Sci Rep. 2021. PMID: 33547328 Free PMC article.

3

Sperm epigenetic clock associates with pregnancy outcomes in the general population.

Pilsner JR, Saddiki H, Whitcomb BW, Suvorov A, Buck Louis GM, Mumford SL, Schisterman EF, Oluwayiose OA, Balzer LB. Pilsner JR, et al. Among authors: saddiki h. Hum Reprod. 2022 Jun 30;37(7):1581-1593. doi: 10.1093/humrep/deac084. Hum Reprod. 2022. PMID: 35552703 Free PMC article.

4

Population-level viral suppression among pregnant and postpartum women in a universal test and treat trial.

Kabami J, Balzer LB, Saddiki H, Ayieko J, Kwarisiima D, Atukunda M, Charlebois ED, Clark TD, Koss CA, Ruel T, Bukusi EA, Cohen CR, Musoke P, Petersen ML, Havlir DV, Kamya MR, Chamie G. Kabami J, et al. Among authors: saddiki h. AIDS. 2020 Jul 15;34(9):1407-1415. doi: 10.1097/QAD.0000000000002564. AIDS. 2020. PMID: 32472768 Free PMC article. Clinical Trial.

5

SCSIM: Jointly simulating correlated single-cell and bulk next-generation DNA sequencing data.

Giguere C, Dubey HV, Sarsani VK, Saddiki H, He S, Flaherty P. Giguere C, et al. Among authors: saddiki h. BMC Bioinformatics. 2020 May 26;21(1):215. doi: 10.1186/s12859-020-03550-1. BMC Bioinformatics. 2020. PMID: 32456609 Free PMC article.

6

GEMINI: a computationally-efficient search engine for large gene expression datasets.

DeFreitas T, Saddiki H, Flaherty P. DeFreitas T, et al. Among authors: saddiki h. BMC Bioinformatics. 2016 Feb 24;17:102. doi: 10.1186/s12859-016-0934-8. BMC Bioinformatics. 2016. PMID: 26911289 Free PMC article.

7

GLAD: a mixed-membership model for heterogeneous tumor subtype classification.

Saddiki H, McAuliffe J, Flaherty P. Saddiki H, et al. Bioinformatics. 2015 Jan 15;31(2):225-32. doi: 10.1093/bioinformatics/btu618. Epub 2014 Sep 29. Bioinformatics. 2015. PMID: 25266225 Free PMC article.

8

Cross-Cohort Mixture Analysis: A Data Integration Approach With Applications on Gestational Age and DNA-Methylation-Derived Gestational Age Acceleration Metrics.

Colicino E, Ascari R, Saddiki H, Merced-Nieves F, Foppa Pedretti N, Huddleston K, Wright RO, Wright RJ; Program Collaborators for Environmental Influences on Child Health Outcomes. Colicino E, et al. Among authors: saddiki h. Biom J. 2024 Dec;66(8):e202300270. doi: 10.1002/bimj.202300270. Biom J. 2024. PMID: 39473136

9

Associations between Sperm Epigenetic Age and Semen Parameters: An Evaluation of Clinical and Non-Clinical Cohorts.

Sawant S, Oluwayiose OA, Nowak K, Maxwell DL, Houle E, Paskavitz AL, Saddiki H, Bertolla RP, Pilsner JR. Sawant S, et al. Among authors: saddiki h. Curr Issues Mol Biol. 2024 Feb 16;46(2):1567-1578. doi: 10.3390/cimb46020101. Curr Issues Mol Biol. 2024. PMID: 38392219 Free PMC article.

10

DNA methylation profiles reveal sex-specific associations between gestational exposure to ambient air pollution and placenta cell-type composition in the PRISM cohort study.

Saddiki H, Zhang X, Colicino E, Wilson A, Kloog I, Wright RO, Wright RJ, Lesseur C. Saddiki H, et al. Clin Epigenetics. 2023 Dec 1;15(1):188. doi: 10.1186/s13148-023-01601-x. Clin Epigenetics. 2023. PMID: 38041176 Free PMC article.

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