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Rapid Identification of Drug Resistance and Phylogeny in M. tuberculosis, Directly from Sputum Samples.
Barbosa-Amezcua M, Cuevas-Córdoba B, Fresno C, Haase-Hernández JI, Carrillo-Sánchez K, Mata-Rocha M, Muñoz-Torrico M, Bäcker C, González-Covarrubias V, Alaez-Verson C, Soberón X. Barbosa-Amezcua M, et al. Among authors: haase hernandez ji. Microbiol Spectr. 2022 Oct 26;10(5):e0125222. doi: 10.1128/spectrum.01252-22. Epub 2022 Sep 14. Microbiol Spectr. 2022. PMID: 36102651 Free PMC article.
A bioinformatics pipeline for Mycobacterium tuberculosis sequencing that cleans contaminant reads from sputum samples.
Cuevas-Córdoba B, Fresno C, Haase-Hernández JI, Barbosa-Amezcua M, Mata-Rocha M, Muñoz-Torrico M, Salazar-Lezama MA, Martínez-Orozco JA, Narváez-Díaz LA, Salas-Hernández J, González-Covarrubias V, Soberón X. Cuevas-Córdoba B, et al. Among authors: haase hernandez ji. PLoS One. 2021 Oct 26;16(10):e0258774. doi: 10.1371/journal.pone.0258774. eCollection 2021. PLoS One. 2021. PMID: 34699523 Free PMC article.