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Annotation of biologically relevant ligands in UniProtKB using ChEBI.
Coudert E, Gehant S, de Castro E, Pozzato M, Baratin D, Neto T, Sigrist CJA, Redaschi N, Bridge A; UniProt Consortium. Coudert E, et al. Among authors: de castro e. Bioinformatics. 2023 Jan 1;39(1):btac793. doi: 10.1093/bioinformatics/btac793. Bioinformatics. 2023. PMID: 36484697 Free PMC article.
Recent improvements to the PROSITE database.
Hulo N, Sigrist CJ, Le Saux V, Langendijk-Genevaux PS, Bordoli L, Gattiker A, De Castro E, Bucher P, Bairoch A. Hulo N, et al. Among authors: de castro e. Nucleic Acids Res. 2004 Jan 1;32(Database issue):D134-7. doi: 10.1093/nar/gkh044. Nucleic Acids Res. 2004. PMID: 14681377 Free PMC article.
The PROSITE database.
Hulo N, Bairoch A, Bulliard V, Cerutti L, De Castro E, Langendijk-Genevaux PS, Pagni M, Sigrist CJ. Hulo N, et al. Among authors: de castro e. Nucleic Acids Res. 2006 Jan 1;34(Database issue):D227-30. doi: 10.1093/nar/gkj063. Nucleic Acids Res. 2006. PMID: 16381852 Free PMC article.
The 20 years of PROSITE.
Hulo N, Bairoch A, Bulliard V, Cerutti L, Cuche BA, de Castro E, Lachaize C, Langendijk-Genevaux PS, Sigrist CJ. Hulo N, et al. Among authors: de castro e. Nucleic Acids Res. 2008 Jan;36(Database issue):D245-9. doi: 10.1093/nar/gkm977. Epub 2007 Nov 14. Nucleic Acids Res. 2008. PMID: 18003654 Free PMC article.
The Universal Protein Resource (UniProt) 2009.
UniProt Consortium. UniProt Consortium. Nucleic Acids Res. 2009 Jan;37(Database issue):D169-74. doi: 10.1093/nar/gkn664. Epub 2008 Oct 4. Nucleic Acids Res. 2009. PMID: 18836194 Free PMC article.
HAMAP: a database of completely sequenced microbial proteome sets and manually curated microbial protein families in UniProtKB/Swiss-Prot.
Lima T, Auchincloss AH, Coudert E, Keller G, Michoud K, Rivoire C, Bulliard V, de Castro E, Lachaize C, Baratin D, Phan I, Bougueleret L, Bairoch A. Lima T, et al. Among authors: de castro e. Nucleic Acids Res. 2009 Jan;37(Database issue):D471-8. doi: 10.1093/nar/gkn661. Epub 2008 Oct 11. Nucleic Acids Res. 2009. PMID: 18849571 Free PMC article.
The Universal Protein Resource (UniProt) in 2010.
UniProt Consortium. UniProt Consortium. Nucleic Acids Res. 2010 Jan;38(Database issue):D142-8. doi: 10.1093/nar/gkp846. Epub 2009 Oct 20. Nucleic Acids Res. 2010. PMID: 19843607 Free PMC article.
PROSITE, a protein domain database for functional characterization and annotation.
Sigrist CJ, Cerutti L, de Castro E, Langendijk-Genevaux PS, Bulliard V, Bairoch A, Hulo N. Sigrist CJ, et al. Among authors: de castro e. Nucleic Acids Res. 2010 Jan;38(Database issue):D161-6. doi: 10.1093/nar/gkp885. Epub 2009 Oct 25. Nucleic Acids Res. 2010. PMID: 19858104 Free PMC article.
227 results