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Computational evolution of an RNA-binding protein towards enhanced oxidized-RNA binding.
Gonzalez-Rivera JC, Orr AA, Engels SM, Jakubowski JM, Sherman MW, O'Connor KN, Matteson T, Woodcock BC, Contreras LM, Tamamis P. Gonzalez-Rivera JC, et al. Among authors: contreras lm. Comput Struct Biotechnol J. 2019 Dec 27;18:137-152. doi: 10.1016/j.csbj.2019.12.003. eCollection 2020. Comput Struct Biotechnol J. 2019. PMID: 31988703 Free PMC article.
Optimization of a novel biophysical model using large scale in vivo antisense hybridization data displays improved prediction capabilities of structurally accessible RNA regions.
Vazquez-Anderson J, Mihailovic MK, Baldridge KC, Reyes KG, Haning K, Cho SH, Amador P, Powell WB, Contreras LM. Vazquez-Anderson J, et al. Among authors: contreras lm. Nucleic Acids Res. 2017 May 19;45(9):5523-5538. doi: 10.1093/nar/gkx115. Nucleic Acids Res. 2017. PMID: 28334800 Free PMC article.
Multiple Small RNAs Interact to Co-regulate Ethanol Tolerance in Zymomonas mobilis.
Han R, Haning K, Gonzalez-Rivera JC, Yang Y, Li R, Cho SH, Huang J, Simonsen BA, Yang S, Contreras LM. Han R, et al. Among authors: contreras lm. Front Bioeng Biotechnol. 2020 Mar 4;8:155. doi: 10.3389/fbioe.2020.00155. eCollection 2020. Front Bioeng Biotechnol. 2020. PMID: 32195236 Free PMC article.
105 results