Oliveira NFB - Search Results

1

Fighting Multidrug Resistance with Ruthenium-Cyclopentadienyl Compounds: Unveiling the Mechanism of P-gp Inhibition.

Teixeira RG, Salaroglio IC, Oliveira NFB, Sequeira JGN, Fontrodona X, Romero I, Machuqueiro M, Tomaz AI, Garcia MH, Riganti C, Valente A. Teixeira RG, et al. Among authors: oliveira nfb. J Med Chem. 2023 Oct 26;66(20):14080-14094. doi: 10.1021/acs.jmedchem.3c01120. Epub 2023 Aug 24. J Med Chem. 2023. PMID: 37616241 Free PMC article.

2

Improved GROMOS 54A7 Charge Sets for Phosphorylated Tyr, Ser, and Thr to Deal with pH-Dependent Binding Phenomena.

Oliveira NFB, Pires IDS, Machuqueiro M. Oliveira NFB, et al. J Chem Theory Comput. 2020 Oct 13;16(10):6368-6376. doi: 10.1021/acs.jctc.0c00529. Epub 2020 Aug 28. J Chem Theory Comput. 2020. PMID: 32809819

3

pK _a Calculations in Membrane Proteins from Molecular Dynamics Simulations.

Oliveira NFB, Silva TFD, Reis PBPS, Machuqueiro M. Oliveira NFB, et al. Methods Mol Biol. 2021;2315:185-195. doi: 10.1007/978-1-0716-1468-6_11. Methods Mol Biol. 2021. PMID: 34302677

4

Predicting stable binding modes from simulated dimers of the D76N mutant of

β

2-microglobulin.

Oliveira NFB, Rodrigues FEP, Vitorino JNM, Loureiro RJS, Faísca PFN, Machuqueiro M. Oliveira NFB, et al. Comput Struct Biotechnol J. 2021 Sep 8;19:5160-5169. doi: 10.1016/j.csbj.2021.09.003. eCollection 2021. Comput Struct Biotechnol J. 2021. PMID: 34630936 Free PMC article.

5

Novel US-CpHMD Protocol to Study the Protonation-Dependent Mechanism of the ATP/ADP Carrier.

Oliveira NFB, Machuqueiro M. Oliveira NFB, et al. J Chem Inf Model. 2022 May 23;62(10):2550-2560. doi: 10.1021/acs.jcim.2c00233. Epub 2022 Apr 20. J Chem Inf Model. 2022. PMID: 35442654 Free PMC article.

6

Interfacial Dynamics and Growth Modes of β₂-Microglobulin Dimers.

Oliveira NFB, Rodrigues FEP, Vitorino JNM, Faísca PFN, Machuqueiro M. Oliveira NFB, et al. J Chem Inf Model. 2023 Jul 24;63(14):4447-4457. doi: 10.1021/acs.jcim.3c00399. Epub 2023 May 3. J Chem Inf Model. 2023. PMID: 37132512 Free PMC article.

7

A novel combinatory treatment against a CDDP-resistant non-small cell lung cancer based on a Ruthenium(II)-cyclopentadienyl compound.

Salaroglio IC, Stefanova D, Teixeira RG, Oliveira NFB, Ahmed A, Fusi F, Tzankova V, Yordanov Y, Machuqueiro M, Saponara S, Valente A, Riganti C. Salaroglio IC, et al. Among authors: oliveira nfb. Pharmacol Res. 2024 Oct;208:107353. doi: 10.1016/j.phrs.2024.107353. Epub 2024 Aug 17. Pharmacol Res. 2024. PMID: 39159730 Free article.

8

Constant-pH MD simulations of the protonation-triggered conformational switching in diphtheria toxin translocation domain.

Oliveira NFB, Ladokhin AS, Machuqueiro M. Oliveira NFB, et al. Biophys J. 2024 Aug 30:S0006-3495(24)00589-7. doi: 10.1016/j.bpj.2024.08.023. Online ahead of print. Biophys J. 2024. PMID: 39215463

9

Histidine Protonation and Conformational Switching in Diphtheria Toxin Translocation Domain.

Rodnin MV, Vasques-Montes V, Kyrychenko A, Oliveira NFB, Kashipathy MM, Battaile KP, Douglas J, Lovell S, Machuqueiro M, Ladokhin AS. Rodnin MV, et al. Among authors: oliveira nfb. Toxins (Basel). 2023 Jun 25;15(7):410. doi: 10.3390/toxins15070410. Toxins (Basel). 2023. PMID: 37505680 Free PMC article.

10

A New Perspective for Vineyard Terroir Identity: Looking for Microbial Indicator Species by Long Read Nanopore Sequencing.

Cruz-Silva A, Laureano G, Pereira M, Dias R, Silva JMD, Oliveira N, Gouveia C, Cruz C, Gama-Carvalho M, Alagna F, Duarte B, Figueiredo A. Cruz-Silva A, et al. Microorganisms. 2023 Mar 6;11(3):672. doi: 10.3390/microorganisms11030672. Microorganisms. 2023. PMID: 36985245 Free PMC article.

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