Schäffer AA - Search Results

1

Pan-Cancer Analysis of Patient Tumor Single-Cell Transcriptomes Identifies Promising Selective and Safe Chimeric Antigen Receptor Targets in Head and Neck Cancer.

Madan S, Sinha S, Chang T, Gutkind JS, Cohen EEW, Schäffer AA, Ruppin E. Madan S, et al. Among authors: schaffer aa. Cancers (Basel). 2023 Oct 8;15(19):4885. doi: 10.3390/cancers15194885. Cancers (Basel). 2023. PMID: 37835579 Free PMC article.

2

Beyond Synthetic Lethality: Charting the Landscape of Pairwise Gene Expression States Associated with Survival in Cancer.

Magen A, Das Sahu A, Lee JS, Sharmin M, Lugo A, Gutkind JS, Schäffer AA, Ruppin E, Hannenhalli S. Magen A, et al. Among authors: schaffer aa. Cell Rep. 2019 Jul 23;28(4):938-948.e6. doi: 10.1016/j.celrep.2019.06.067. Cell Rep. 2019. PMID: 31340155 Free PMC article.

3

In vitro and in vivo identification of clinically approved drugs that modify ACE2 expression.

Sinha S, Cheng K, Schäffer AA, Aldape K, Schiff E, Ruppin E. Sinha S, et al. Among authors: schaffer aa. Mol Syst Biol. 2020 Jul;16(7):e9628. doi: 10.15252/msb.20209628. Mol Syst Biol. 2020. PMID: 32729248 Free PMC article.

4

The GENDULF algorithm: mining transcriptomics to uncover modifier genes for monogenic diseases.

Auslander N, Ramos DM, Zelaya I, Karathia H, Crawford TO, Schäffer AA, Sumner CJ, Ruppin E. Auslander N, et al. Among authors: schaffer aa. Mol Syst Biol. 2020 Dec;16(12):e9701. doi: 10.15252/msb.20209701. Mol Syst Biol. 2020. PMID: 33438800 Free PMC article.

5

Identification of drugs associated with reduced severity of COVID-19 - a case-control study in a large population.

Israel A, Schäffer AA, Cicurel A, Cheng K, Sinha S, Schiff E, Feldhamer I, Tal A, Lavie G, Ruppin E. Israel A, et al. Among authors: schaffer aa. Elife. 2021 Jul 27;10:e68165. doi: 10.7554/eLife.68165. Elife. 2021. PMID: 34313216 Free PMC article.

6

The tumour microenvironment shapes innate lymphoid cells in patients with hepatocellular carcinoma.

Heinrich B, Gertz EM, Schäffer AA, Craig A, Ruf B, Subramanyam V, McVey JC, Diggs LP, Heinrich S, Rosato U, Ma C, Yan C, Hu Y, Zhao Y, Shen TW, Kapoor V, Telford W, Kleiner DE, Stovroff MK, Dhani HS, Kang J, Fishbein T, Wang XW, Ruppin E, Kroemer A, Greten TF, Korangy F. Heinrich B, et al. Among authors: schaffer aa. Gut. 2022 Jun;71(6):1161-1175. doi: 10.1136/gutjnl-2021-325288. Epub 2021 Aug 2. Gut. 2022. PMID: 34340996 Free PMC article.

7

Large-scale study of antibody titer decay following BNT162b2 mRNA vaccine or SARS-CoV-2 infection.

Israel A, Shenhar Y, Green I, Merzon E, Golan-Cohen A, Schäffer AA, Ruppin E, Vinker S, Magen E. Israel A, et al. Among authors: schaffer aa. medRxiv [Preprint]. 2021 Aug 21:2021.08.19.21262111. doi: 10.1101/2021.08.19.21262111. medRxiv. 2021. Update in: Vaccines (Basel). 2021 Dec 31;10(1):64. doi: 10.3390/vaccines10010064. PMID: 34462761 Free PMC article. Updated. Preprint.

8

Integration of adeno-associated virus (AAV) into the genomes of most Thai and Mongolian liver cancer patients does not induce oncogenesis.

Schäffer AA, Dominguez DA, Chapman LM, Gertz EM, Budhu A, Forgues M, Chaisaingmongkol J, Rabibhadana S, Pupacdi B, Wu X, Bayarsaikhan E, Harris CC, Ruchirawat M, Ruppin E, Wang XW. Schäffer AA, et al. BMC Genomics. 2021 Nov 11;22(1):814. doi: 10.1186/s12864-021-08098-9. BMC Genomics. 2021. PMID: 34763675 Free PMC article.

9

Elapsed time since BNT162b2 vaccine and risk of SARS-CoV-2 infection: test negative design study.

Israel A, Merzon E, Schäffer AA, Shenhar Y, Green I, Golan-Cohen A, Ruppin E, Magen E, Vinker S. Israel A, et al. Among authors: schaffer aa. BMJ. 2021 Nov 24;375:e067873. doi: 10.1136/bmj-2021-067873. BMJ. 2021. PMID: 34819275 Free PMC article.

10

Deconvolving Clinically Relevant Cellular Immune Cross-talk from Bulk Gene Expression Using CODEFACS and LIRICS Stratifies Patients with Melanoma to Anti-PD-1 Therapy.

Wang K, Patkar S, Lee JS, Gertz EM, Robinson W, Schischlik F, Crawford DR, Schäffer AA, Ruppin E. Wang K, et al. Among authors: schaffer aa. Cancer Discov. 2022 Apr 1;12(4):1088-1105. doi: 10.1158/2159-8290.CD-21-0887. Cancer Discov. 2022. PMID: 34983745 Free PMC article.

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