Shi Q - Search Results

1

Clinically relevant antibiotic resistance genes are linked to a limited set of taxa within gut microbiome worldwide.

Diebold PJ, Rhee MW, Shi Q, Trung NV, Umrani F, Ahmed S, Kulkarni V, Deshpande P, Alexander M, Thi Hoa N, Christakis NA, Iqbal NT, Ali SA, Mathad JS, Brito IL. Diebold PJ, et al. Among authors: shi q. Nat Commun. 2023 Nov 14;14(1):7366. doi: 10.1038/s41467-023-42998-6. Nat Commun. 2023. PMID: 37963868 Free PMC article.

2

Chemoproteomic Profiling of Gut Microbiota-Associated Bile Salt Hydrolase Activity.

Parasar B, Zhou H, Xiao X, Shi Q, Brito IL, Chang PV. Parasar B, et al. Among authors: shi q. ACS Cent Sci. 2019 May 22;5(5):867-873. doi: 10.1021/acscentsci.9b00147. Epub 2019 Apr 18. ACS Cent Sci. 2019. PMID: 31139722 Free PMC article.

3

Obesity and load-induced posttraumatic osteoarthritis in the absence of fracture or surgical trauma.

Luna M, Guss JD, Vasquez-Bolanos LS, Alepuz AJ, Dornevil S, Strong J, Alabi D, Shi Q, Pannellini T, Otero M, Brito IL, van der Meulen MCH, Goldring SR, Hernandez CJ. Luna M, et al. Among authors: shi q. J Orthop Res. 2021 May;39(5):1007-1016. doi: 10.1002/jor.24799. Epub 2020 Jul 17. J Orthop Res. 2021. PMID: 32658313 Free PMC article.

4

Widespread transfer of mobile antibiotic resistance genes within individual gut microbiomes revealed through bacterial Hi-C.

Kent AG, Vill AC, Shi Q, Satlin MJ, Brito IL. Kent AG, et al. Among authors: shi q. Nat Commun. 2020 Sep 1;11(1):4379. doi: 10.1038/s41467-020-18164-7. Nat Commun. 2020. PMID: 32873785 Free PMC article.

5

Highly multiplexed spatial mapping of microbial communities.

Shi H, Shi Q, Grodner B, Lenz JS, Zipfel WR, Brito IL, De Vlaminck I. Shi H, et al. Among authors: shi q. Nature. 2020 Dec;588(7839):676-681. doi: 10.1038/s41586-020-2983-4. Epub 2020 Dec 2. Nature. 2020. PMID: 33268897 Free PMC article.

6

A multifaceted cellular damage repair and prevention pathway promotes high-level tolerance to β-lactam antibiotics.

Shin JH, Choe D, Ransegnola B, Hong HR, Onyekwere I, Cross T, Shi Q, Cho BK, Westblade LF, Brito IL, Dörr T. Shin JH, et al. Among authors: shi q. EMBO Rep. 2021 Feb 3;22(2):e51790. doi: 10.15252/embr.202051790. Epub 2021 Jan 18. EMBO Rep. 2021. PMID: 33463026 Free PMC article.

7

Geographic differences in gut microbiota composition impact susceptibility to enteric infection.

Porras AM, Shi Q, Zhou H, Callahan R, Montenegro-Bethancourt G, Solomons N, Brito IL. Porras AM, et al. Among authors: shi q. Cell Rep. 2021 Jul 27;36(4):109457. doi: 10.1016/j.celrep.2021.109457. Cell Rep. 2021. PMID: 34320343 Free PMC article.

8

Inflammatory Bowel Disease-Associated Gut Commensals Degrade Components of the Extracellular Matrix.

Porras AM, Zhou H, Shi Q, Xiao X; JRI Live Cell Bank; Longman R, Brito IL. Porras AM, et al. Among authors: shi q. mBio. 2022 Dec 20;13(6):e0220122. doi: 10.1128/mbio.02201-22. Epub 2022 Nov 29. mBio. 2022. PMID: 36445085 Free PMC article.

9

Keystone pathobionts associated with colorectal cancer promote oncogenic reprograming.

Jones J, Shi Q, Nath RR, Brito IL. Jones J, et al. Among authors: shi q. bioRxiv [Preprint]. 2023 Apr 3:2023.04.03.535410. doi: 10.1101/2023.04.03.535410. bioRxiv. 2023. Update in: PLoS One. 2024 Feb 16;19(2):e0297897. doi: 10.1371/journal.pone.0297897. PMID: 37066368 Free PMC article. Updated. Preprint.

10

Keystone pathobionts associated with colorectal cancer promote oncogenic reprograming.

Jones J, Shi Q, Nath RR, Brito IL. Jones J, et al. Among authors: shi q. PLoS One. 2024 Feb 16;19(2):e0297897. doi: 10.1371/journal.pone.0297897. eCollection 2024. PLoS One. 2024. PMID: 38363784 Free PMC article.

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