Benaglio P - Search Results

1

Single cell multiome profiling of pancreatic islets reveals physiological changes in cell type-specific regulation associated with diabetes risk.

Mummey HM, Elison W, Korgaonkar K, Elgamal RM, Kudtarkar P, Griffin E, Benaglio P, Miller M, Jha A, Fox JEM, McCarthy MI, Preissl S, Gloyn AL, MacDonald PE, Gaulton KJ. Mummey HM, et al. Among authors: benaglio p. bioRxiv [Preprint]. 2024 Aug 6:2024.08.03.606460. doi: 10.1101/2024.08.03.606460. bioRxiv. 2024. PMID: 39149326 Free PMC article. Preprint.

2

Complex regulatory networks influence pluripotent cell state transitions in human iPSCs.

Arthur TD, Nguyen JP, D'Antonio-Chronowska A, Matsui H, Silva NS, Joshua IN; iPSCORE Consortium; Luchessi AD, Greenwald WWY, D'Antonio M, Pera MF, Frazer KA. Arthur TD, et al. Nat Commun. 2024 Feb 23;15(1):1664. doi: 10.1038/s41467-024-45506-6. Nat Commun. 2024. PMID: 38395976 Free PMC article.

3

Genetic discovery and risk prediction for type 1 diabetes in individuals without high-risk HLA-DR3/DR4 haplotypes.

McGrail C, Chiou J, Elgamal R, Luckett AM, Oram RA, Benaglio P, Gaulton KJ. McGrail C, et al. Among authors: benaglio p. medRxiv [Preprint]. 2023 Dec 4:2023.11.11.23298405. doi: 10.1101/2023.11.11.23298405. medRxiv. 2023. PMID: 37986756 Free PMC article. Preprint.

4

eQTL mapping in fetal-like pancreatic progenitor cells reveals early developmental insights into diabetes risk.

Nguyen JP, Arthur TD, Fujita K, Salgado BM, Donovan MKR; iPSCORE Consortium; Matsui H, Kim JH, D'Antonio-Chronowska A, D'Antonio M, Frazer KA. Nguyen JP, et al. Nat Commun. 2023 Oct 30;14(1):6928. doi: 10.1038/s41467-023-42560-4. Nat Commun. 2023. PMID: 37903777 Free PMC article.

5

An Integrated Map of Cell Type-Specific Gene Expression in Pancreatic Islets.

Elgamal RM, Kudtarkar P, Melton RL, Mummey HM, Benaglio P, Okino ML, Gaulton KJ. Elgamal RM, et al. Among authors: benaglio p. Diabetes. 2023 Nov 1;72(11):1719-1728. doi: 10.2337/db23-0130. Diabetes. 2023. PMID: 37582230 Free PMC article.

6

Author Correction: Fine mapping spatiotemporal mechanisms of genetic variants underlying cardiac traits and disease.

D'Antonio M, Nguyen JP, Arthur TD; iPSCORE Consortium; Matsui H, D'Antonio-Chronowska A, Frazer KA. D'Antonio M, et al. Nat Commun. 2023 Jul 20;14(1):4370. doi: 10.1038/s41467-023-40048-9. Nat Commun. 2023. PMID: 37474502 Free PMC article. No abstract available.

7

Mapping genetic effects on cell type-specific chromatin accessibility and annotating complex immune trait variants using single nucleus ATAC-seq in peripheral blood.

Benaglio P, Newsome J, Han JY, Chiou J, Aylward A, Corban S, Miller M, Okino ML, Kaur J, Preissl S, Gorkin DU, Gaulton KJ. Benaglio P, et al. PLoS Genet. 2023 Jun 8;19(6):e1010759. doi: 10.1371/journal.pgen.1010759. eCollection 2023 Jun. PLoS Genet. 2023. PMID: 37289818 Free PMC article.

8

Fine mapping spatiotemporal mechanisms of genetic variants underlying cardiac traits and disease.

D'Antonio M, Nguyen JP, Arthur TD; iPSCORE Consortium; Matsui H, D'Antonio-Chronowska A, Frazer KA. D'Antonio M, et al. Nat Commun. 2023 Feb 28;14(1):1132. doi: 10.1038/s41467-023-36638-2. Nat Commun. 2023. PMID: 36854752 Free PMC article.

9

An integrated map of cell type-specific gene expression in pancreatic islets.

Elgamal RM, Kudtarkar P, Melton RL, Mummey HM, Benaglio P, Okino ML, Gaulton KJ. Elgamal RM, et al. Among authors: benaglio p. bioRxiv [Preprint]. 2023 Feb 4:2023.02.03.526994. doi: 10.1101/2023.02.03.526994. bioRxiv. 2023. Update in: Diabetes. 2023 Nov 1;72(11):1719-1728. doi: 10.2337/db23-0130. PMID: 36778506 Free PMC article. Updated. Preprint.

10

Type 1 diabetes risk genes mediate pancreatic beta cell survival in response to proinflammatory cytokines.

Benaglio P, Zhu H, Okino ML, Yan J, Elgamal R, Nariai N, Beebe E, Korgaonkar K, Qiu Y, Donovan MKR, Chiou J, Wang G, Newsome J, Kaur J, Miller M, Preissl S, Corban S, Aylward A, Taipale J, Ren B, Frazer KA, Sander M, Gaulton KJ. Benaglio P, et al. Cell Genom. 2022 Nov 11;2(12):100214. doi: 10.1016/j.xgen.2022.100214. eCollection 2022 Dec 14. Cell Genom. 2022. PMID: 36778047 Free PMC article.

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