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A multi-omics systems vaccinology resource to develop and test computational models of immunity.
Shinde P, Soldevila F, Reyna J, Aoki M, Rasmussen M, Willemsen L, Kojima M, Ha B, Greenbaum JA, Overton JA, Guzman-Orozco H, Nili S, Orfield S, Gygi JP, da Silva Antunes R, Sette A, Grant B, Olsen LR, Konstorum A, Guan L, Ay F, Kleinstein SH, Peters B. Shinde P, et al. Among authors: ay f. Cell Rep Methods. 2024 Mar 25;4(3):100731. doi: 10.1016/j.crmeth.2024.100731. Epub 2024 Mar 14. Cell Rep Methods. 2024. PMID: 38490204 Free PMC article.
Rewiring of the 3D genome during acquisition of carboplatin resistance in a triple-negative breast cancer patient-derived xenograft.
Dozmorov MG, Marshall MA, Rashid NS, Grible JM, Valentine A, Olex AL, Murthy K, Chakraborty A, Reyna J, Figueroa DS, Hinojosa-Gonzalez L, Da-Inn Lee E, Baur BA, Roy S, Ay F, Harrell JC. Dozmorov MG, et al. Among authors: ay f. Sci Rep. 2023 Apr 3;13(1):5420. doi: 10.1038/s41598-023-32568-7. Sci Rep. 2023. PMID: 37012431 Free PMC article.
Publisher Correction: Rewiring of the 3D genome during acquisition of carboplatin resistance in a triple-negative breast cancer patient-derived xenograft.
Dozmorov MG, Marshall MA, Rashid NS, Grible JM, Valentine A, Olex AL, Murthy K, Chakraborty A, Reyna J, Figueroa DS, Hinojosa-Gonzalez L, Da-Inn Lee E, Baur BA, Roy S, Ay F, Harrell JC. Dozmorov MG, et al. Among authors: ay f. Sci Rep. 2023 May 9;13(1):7522. doi: 10.1038/s41598-023-33284-y. Sci Rep. 2023. PMID: 37160896 Free PMC article. No abstract available.
Lymphotoxin beta receptor signaling directly controls airway smooth muscle deregulation and asthmatic lung dysfunction.
Miki H, Kiosses WB, Manresa MC, Gupta RK, Sethi GS, Herro R, Da Silva Antunes R, Dutta P, Miller M, Fung K, Chawla A, Dobaczewska K, Ay F, Broide DH, Tumanov AV, Croft M. Miki H, et al. Among authors: ay f. J Allergy Clin Immunol. 2023 Apr;151(4):976-990.e5. doi: 10.1016/j.jaci.2022.11.016. Epub 2022 Dec 5. J Allergy Clin Immunol. 2023. PMID: 36473503 Free PMC article.
Atypical B cells consist of subsets with distinct functional profiles.
Reyes RA, Batugedara G, Dutta P, Reers AB, Garza R, Ssewanyana I, Jagannathan P, Feeney ME, Greenhouse B, Bol S, Ay F, Bunnik EM. Reyes RA, et al. Among authors: ay f. iScience. 2023 Nov 20;26(12):108496. doi: 10.1016/j.isci.2023.108496. eCollection 2023 Dec 15. iScience. 2023. PMID: 38098745 Free PMC article.
A systems vaccinology resource to develop and test computational models of immunity.
Shinde P, Soldevila F, Reyna J, Aoki M, Rasmussen M, Willemsen L, Kojima M, Ha B, Greenbaum JA, Overton JA, Guzman-Orozco H, Nili S, Orfield S, Gygi JP, da Silva Antunes R, Sette A, Grant B, Olsen LR, Konstorum A, Guan L, Ay F, Kleinstein SH, Peters B. Shinde P, et al. Among authors: ay f. bioRxiv [Preprint]. 2023 Aug 29:2023.08.28.555193. doi: 10.1101/2023.08.28.555193. bioRxiv. 2023. Update in: Cell Rep Methods. 2024 Mar 25;4(3):100731. doi: 10.1016/j.crmeth.2024.100731. PMID: 37693565 Free PMC article. Updated. Preprint.
120 results