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O-glycosylation contributes to mammalian glycoRNA biogenesis.
Porat J, Watkins CP, Jin C, Xie X, Tan X, Lebedenko CG, Hemberger H, Shin W, Chai P, Collins JJ, Garcia BA, Bojar D, Flynn RA. Porat J, et al. Among authors: flynn ra. bioRxiv [Preprint]. 2024 Aug 29:2024.08.28.610074. doi: 10.1101/2024.08.28.610074. bioRxiv. 2024. PMID: 39257776 Free PMC article. Preprint.
Development and application of GlycanDIA workflow for glycomic analysis.
Xie Y, Liu X, Zhao C, Chen S, Wang S, Lin Z, Robison FM, George BM, Flynn RA, Lebrilla CB, Garcia BA. Xie Y, et al. Among authors: flynn ra. bioRxiv [Preprint]. 2024 Mar 13:2024.03.12.584702. doi: 10.1101/2024.03.12.584702. bioRxiv. 2024. PMID: 38559279 Free PMC article. Preprint.
A (cross)link in the chains.
Watkins CP, Flynn RA. Watkins CP, et al. Among authors: flynn ra. Nat Chem. 2023 Jan;15(1):5-6. doi: 10.1038/s41557-022-01116-7. Nat Chem. 2023. PMID: 36609645 No abstract available.
Progenitor identification and SARS-CoV-2 infection in long-term human distal lung organoid cultures.
Salahudeen AA, Choi SS, Rustagi A, Zhu J, de la O SM, Flynn RA, Margalef-Català M, Santos AJM, Ju J, Batish A, van Unen V, Usui T, Zheng GXY, Edwards CE, Wagar LE, Luca V, Anchang B, Nagendran M, Nguyen K, Hart DJ, Terry JM, Belgrader P, Ziraldo SB, Mikkelsen TS, Harbury PB, Glenn JS, Garcia KC, Davis MM, Baric RS, Sabatti C, Amieva MR, Blish CA, Desai TJ, Kuo CJ. Salahudeen AA, et al. Among authors: flynn ra. bioRxiv [Preprint]. 2020 Jul 27:2020.07.27.212076. doi: 10.1101/2020.07.27.212076. bioRxiv. 2020. Update in: Nature. 2020 Dec;588(7839):670-675. doi: 10.1038/s41586-020-3014-1. PMID: 32743583 Free PMC article. Updated. Preprint.
Systematic discovery and functional interrogation of SARS-CoV-2 viral RNA-host protein interactions during infection.
Flynn RA, Belk JA, Qi Y, Yasumoto Y, Schmitz CO, Mumbach MR, Limaye A, Wei J, Alfajaro MM, Parker KR, Chang HY, Horvath TL, Carette JE, Bertozzi C, Wilen CB, Satpathy AT. Flynn RA, et al. bioRxiv [Preprint]. 2020 Oct 6:2020.10.06.327445. doi: 10.1101/2020.10.06.327445. bioRxiv. 2020. Update in: Cell. 2021 Apr 29;184(9):2394-2411.e16. doi: 10.1016/j.cell.2021.03.012. PMID: 33052334 Free PMC article. Updated. Preprint.
irCLIP-RNP and Re-CLIP reveal patterns of dynamic protein associations on RNA.
Ducoli L, Zarnegar BJ, Porter DF, Meyers RM, Miao W, Riley NM, Srinivasan S, Jackrazi LV, Yang YY, Li Z, Wang Y, Bertozzi CR, Flynn RA, Khavari PA. Ducoli L, et al. Among authors: flynn ra. bioRxiv [Preprint]. 2024 Sep 28:2024.09.27.615518. doi: 10.1101/2024.09.27.615518. bioRxiv. 2024. PMID: 39386644 Free PMC article. Preprint.
The modified RNA base acp3U is an attachment site for N-glycans in glycoRNA.
Xie Y, Chai P, Till NA, Hemberger H, Lebedenko CG, Porat J, Watkins CP, Caldwell RM, George BM, Perr J, Bertozzi CR, Garcia BA, Flynn RA. Xie Y, et al. Among authors: flynn ra. Cell. 2024 Sep 19;187(19):5228-5237.e12. doi: 10.1016/j.cell.2024.07.044. Epub 2024 Aug 21. Cell. 2024. PMID: 39173631
hnRNPM protects against the dsRNA-mediated interferon response by repressing LINE-associated cryptic splicing.
Zheng R, Dunlap M, Bobkov GOM, Gonzalez-Figueroa C, Patel KJ, Lyu J, Harvey SE, Chan TW, Quinones-Valdez G, Choudhury M, Le Roux CA, Bartels MD, Vuong A, Flynn RA, Chang HY, Van Nostrand EL, Xiao X, Cheng C. Zheng R, et al. Among authors: flynn ra. Mol Cell. 2024 Jun 6;84(11):2087-2103.e8. doi: 10.1016/j.molcel.2024.05.004. Epub 2024 May 29. Mol Cell. 2024. PMID: 38815579
91 results