R01 HG003143-06/HG/NHGRI NIH HHS/United States[Grants and Funding] - Search Results

Year	Number of Results
2009	6
2010	6
2011	3
2024	0

1

Comprehensive mapping of long-range interactions reveals folding principles of the human genome.

Lieberman-Aiden E, van Berkum NL, Williams L, Imakaev M, Ragoczy T, Telling A, Amit I, Lajoie BR, Sabo PJ, Dorschner MO, Sandstrom R, Bernstein B, Bender MA, Groudine M, Gnirke A, Stamatoyannopoulos J, Mirny LA, Lander ES, Dekker J. Lieberman-Aiden E, et al. Science. 2009 Oct 9;326(5950):289-93. doi: 10.1126/science.1181369. Science. 2009. PMID: 19815776 Free PMC article.

2

Chromatin globules: a common motif of higher order chromosome structure?

Sanyal A, Baù D, Martí-Renom MA, Dekker J. Sanyal A, et al. Curr Opin Cell Biol. 2011 Jun;23(3):325-31. doi: 10.1016/j.ceb.2011.03.009. Epub 2011 Apr 12. Curr Opin Cell Biol. 2011. PMID: 21489772 Free PMC article. Review.

3

Integrating one-dimensional and three-dimensional maps of genomes.

Naumova N, Dekker J. Naumova N, et al. J Cell Sci. 2010 Jun 15;123(Pt 12):1979-88. doi: 10.1242/jcs.051631. J Cell Sci. 2010. PMID: 20519580 Free PMC article.

4

Genomics tools for unraveling chromosome architecture.

van Steensel B, Dekker J. van Steensel B, et al. Nat Biotechnol. 2010 Oct;28(10):1089-95. doi: 10.1038/nbt.1680. Nat Biotechnol. 2010. PMID: 20944601 Free PMC article.

5

Mediator and cohesin connect gene expression and chromatin architecture.

Kagey MH, Newman JJ, Bilodeau S, Zhan Y, Orlando DA, van Berkum NL, Ebmeier CC, Goossens J, Rahl PB, Levine SS, Taatjes DJ, Dekker J, Young RA. Kagey MH, et al. Nature. 2010 Sep 23;467(7314):430-5. doi: 10.1038/nature09380. Epub 2010 Aug 18. Nature. 2010. PMID: 20720539 Free PMC article.

6

Yeast silent mating type loci form heterochromatic clusters through silencer protein-dependent long-range interactions.

Miele A, Bystricky K, Dekker J. Miele A, et al. PLoS Genet. 2009 May;5(5):e1000478. doi: 10.1371/journal.pgen.1000478. Epub 2009 May 8. PLoS Genet. 2009. PMID: 19424429 Free PMC article.

7

Cell-type-specific long-range looping interactions identify distant regulatory elements of the CFTR gene.

Gheldof N, Smith EM, Tabuchi TM, Koch CM, Dunham I, Stamatoyannopoulos JA, Dekker J. Gheldof N, et al. Nucleic Acids Res. 2010 Jul;38(13):4325-36. doi: 10.1093/nar/gkq175. Epub 2010 Mar 31. Nucleic Acids Res. 2010. PMID: 20360044 Free PMC article.

8

A long noncoding RNA maintains active chromatin to coordinate homeotic gene expression.

Wang KC, Yang YW, Liu B, Sanyal A, Corces-Zimmerman R, Chen Y, Lajoie BR, Protacio A, Flynn RA, Gupta RA, Wysocka J, Lei M, Dekker J, Helms JA, Chang HY. Wang KC, et al. Nature. 2011 Apr 7;472(7341):120-4. doi: 10.1038/nature09819. Epub 2011 Mar 20. Nature. 2011. PMID: 21423168 Free PMC article.

9

Mechanisms that regulate localization of a DNA double-strand break to the nuclear periphery.

Oza P, Jaspersen SL, Miele A, Dekker J, Peterson CL. Oza P, et al. Genes Dev. 2009 Apr 15;23(8):912-27. doi: 10.1101/gad.1782209. Genes Dev. 2009. PMID: 19390086 Free PMC article.

10

The three-dimensional folding of the α-globin gene domain reveals formation of chromatin globules.

Baù D, Sanyal A, Lajoie BR, Capriotti E, Byron M, Lawrence JB, Dekker J, Marti-Renom MA. Baù D, et al. Nat Struct Mol Biol. 2011 Jan;18(1):107-14. doi: 10.1038/nsmb.1936. Epub 2010 Dec 5. Nat Struct Mol Biol. 2011. PMID: 21131981 Free PMC article.

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