Key players and team play: anaerobic microbial communities in hydrocarbon-contaminated aquifers (Q34220430)

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Englisch	Key players and team play: anaerobic microbial communities in hydrocarbon-contaminated aquifers	scientific article

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scholarly article

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Europe PubMed Central

PubMed publication ID

31 July 2017

Key players and team play: anaerobic microbial communities in hydrocarbon-contaminated aquifers (English)

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Europe PubMed Central

PubMed publication ID

31 July 2017

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based on heuristic

inferred from title

author name string

Sabine Kleinsteuber

1

1 reference

Europe PubMed Central

PubMed publication ID

31 July 2017

Kathleen M Schleinitz

2

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Europe PubMed Central

PubMed publication ID

31 July 2017

Carsten Vogt

3

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Europe PubMed Central

PubMed publication ID

31 July 2017

language of work or name

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publication date

4 April 2012

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Europe PubMed Central

PubMed publication ID

31 July 2017

Applied Microbiology and Biotechnology

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Europe PubMed Central

PubMed publication ID

31 July 2017

94

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Europe PubMed Central

PubMed publication ID

31 July 2017

4

1 reference

Europe PubMed Central

PubMed publication ID

31 July 2017

851-873

1 reference

Europe PubMed Central

PubMed publication ID

31 July 2017

Pyrosequence analysis of unamplified and whole genome amplified DNA from hydrocarbon-contaminated groundwater.

1 reference

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Anaerobic benzene degradation by Gram-positive sulfate-reducing bacteria.

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21 January 2018

Environmental whole-genome amplification to access microbial populations in contaminated sediments

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Bioremediation and monitoring of aromatic-polluted habitats

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High Resolution Analysis of Contaminated Aquifer Sediments and Groundwater—What Can be Learned in Terms of Natural Attenuation?

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A perfect genome annotation is within reach with the proteomics and genomics alliance.

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Acetogens and acetoclastic methanosarcinales govern methane formation in abandoned coal mines

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A real-time polymerase chain reaction method for monitoring anaerobic, hydrocarbon-degrading bacteria based on a catabolic gene

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Comparative assessments of benzene, toluene, and xylene natural attenuation by quantitative polymerase chain reaction analysis of a catabolic gene, signature metabolites, and compound-specific isotope analysis

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Improving protein extraction and separation methods for investigating the metaproteome of anaerobic benzene communities within sediments.

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Enrichment and characterization of a sulfate-reducing toluene-degrading microbial consortium by combining in situ microcosms and stable isotope probing techniques

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Current approaches for the assessment of in situ biodegradation.

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Dominance of Geobacteraceae in BTX-degrading enrichments from an iron-reducing aquifer

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Diversity of benzyl- and alkylsuccinate synthase genes in hydrocarbon-impacted environments and enrichment cultures

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Early anaerobic metabolisms

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Biodegradation of aromatic compounds: current status and opportunities for biomolecular approaches

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Anaerobic catabolism of aromatic compounds: a genetic and genomic view.

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Anaerobic benzene oxidation coupled to nitrate reduction in pure culture by two strains of Dechloromonas

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The use of nucleic acid based stable isotope probing to identify the microorganisms responsible for anaerobic benzene and toluene biodegradation

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Enhanced anaerobic biodegradation of benzene-toluene-ethylbenzene-xylene-ethanol mixtures in bioaugmented aquifer columns

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Anaerobic phenanthrene mineralization by a carboxylating sulfate-reducing bacterial enrichment

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Rapid amplification of plasmid and phage DNA using Phi 29 DNA polymerase and multiply-primed rolling circle amplification

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Extent and variation of phage-borne bacterial 16S rRNA gene sequences in wastewater environments.

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Nitrite-driven anaerobic methane oxidation by oxygenic bacteria

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Anaerobic biodegradation of aromatic hydrocarbons: pathways and prospects

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Methanogenic toluene metabolism: community structure and intermediates

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Microbial degradation of aromatic compounds - from one strategy to four

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Metagenomic analysis of two enhanced biological phosphorus removal (EBPR) sludge communities

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Microbial metagenomics: beyond the genome

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Phylogenetic diversity and metagenomics of candidate division OP3.

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Microbial biodiversity in groundwater ecosystems

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Genes encoding the candidate enzyme for anaerobic activation of n-alkanes in the denitrifying bacterium, strain HxN1.

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Adding handles to unhandy substrates: anaerobic hydrocarbon activation mechanisms

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Metagenomic insights into evolution of a heavy metal-contaminated groundwater microbial community

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Dynamics of an oligotrophic bacterial aquifer community during contact with a groundwater plume contaminated with benzene, toluene, ethylbenzene, and xylenes: an in situ mesocosm study

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Enrichment of anaerobic benzene-degrading microorganisms by in situ microcosms

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Functional characterization of an anaerobic benzene-degrading enrichment culture by DNA stable isotope probing

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Anaerobic oxidation of benzene by the hyperthermophilic archaeon Ferroglobus placidus

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Non-sulfate-reducing, syntrophic bacteria affiliated with desulfotomaculum cluster I are widely distributed in methanogenic environments

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Comparison of the specificities and efficacies of primers for aromatic dioxygenase gene analysis of environmental samples

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Phase preference by active, acetate-utilizing bacteria at the rifle, CO integrated field research challenge site.

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Anaerobic naphthalene degradation by Gram-positive, iron-reducing bacteria.

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Molecular characterization of bacterial communities mineralizing benzene under sulfate-reducing conditions

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The use of stable isotope probing to identify key iron-reducing microorganisms involved in anaerobic benzene degradation

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Desulfitobacterium aromaticivorans sp. nov. and Geobacter toluenoxydans sp. nov., iron-reducing bacteria capable of anaerobic degradation of monoaromatic hydrocarbons

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6-Oxocyclohex-1-ene-1-carbonyl-coenzyme A hydrolases from obligately anaerobic bacteria: characterization and identification of its gene as a functional marker for aromatic compounds degrading anaerobes.

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Combined application of PCR-based functional assays for the detection of aromatic-compound-degrading anaerobes.

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Soil-specific limitations for access and analysis of soil microbial communities by metagenomics

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The bzd gene cluster, coding for anaerobic benzoate catabolism, in Azoarcus sp. strain CIB

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Multiple syntrophic interactions in a terephthalate-degrading methanogenic consortium

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21 January 2018

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21 January 2018

Isotopic evidence suggests different initial reaction mechanisms for anaerobic benzene biodegradation

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21 January 2018

Syntrophy in anaerobic global carbon cycles

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21 January 2018

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21 January 2018

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21 January 2018

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21 January 2018

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21 January 2018

Community dynamics within a bacterial consortium during growth on toluene under sulfate-reducing conditions.

1 reference

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21 January 2018

Anaerobic degradation of naphthalene and 2-methylnaphthalene by strains of marine sulfate-reducing bacteria.

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21 January 2018

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21 January 2018

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21 January 2018

Who eats what, where and when? Isotope-labelling experiments are coming of age.

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21 January 2018

Identification of critical members in a sulfidogenic benzene-degrading consortium by DNA stable isotope probing.

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21 January 2018

Host cell-free growth of the Q fever bacterium Coxiella burnetii

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Utilization of microbial biofilms as monitors of bioremediation.

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21 January 2018

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21 January 2018

Electron acceptor-dependent identification of key anaerobic toluene degraders at a tar-oil-contaminated aquifer by Pyro-SIP.

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21 January 2018

Metabolic flexibility of sulfate-reducing bacteria

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21 January 2018

Isolation of Succinivibrionaceae implicated in low methane emissions from Tammar wallabies

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21 January 2018

Diversity of uncultured Epsilonproteobacteria from terrestrial sulfidic caves and springs

1 reference

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21 January 2018

Sporotomaculum syntrophicum sp. nov., a novel anaerobic, syntrophic benzoate-degrading bacterium isolated from methanogenic sludge treating wastewater from terephthalate manufacturing

1 reference

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21 January 2018

Pelotomaculum terephthalicum sp. nov. and Pelotomaculum isophthalicum sp. nov.: two anaerobic bacteria that degrade phthalate isomers in syntrophic association with hydrogenotrophic methanogens

1 reference

https://api.crossref.org/works/10.1007%2FS00253-012-4025-0

21 January 2018

Functional genomics of an anaerobic aromatic-degrading denitrifying bacterium, strain EbN1.

1 reference

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21 January 2018

Effects of hydrogen and acetate on benzene mineralisation under sulphate-reducing conditions.

1 reference

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21 January 2018

Whole genome amplification and de novo assembly of single bacterial cells

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21 January 2018

Syntrophic acetate oxidation under thermophilic methanogenic condition in Chinese paddy field soil

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21 January 2018

Identification of putative benzene-degrading bacteria in methanogenic enrichment cultures.

1 reference

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21 January 2018

Metabolic analysis of the soil microbe Dechloromonas aromatica str. RCB: indications of a surprisingly complex life-style and cryptic anaerobic pathways for aromatic degradation

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21 January 2018

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21 January 2018

Next generation sequencing and bioinformatic bottlenecks: the current state of metagenomic data analysis.

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21 January 2018

Identification of acetate-utilizing Bacteria and Archaea in methanogenic profundal sediments of Lake Kinneret (Israel) by stable isotope probing of rRNA.

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21 January 2018

Anaerobic degradation of the aromatic hydrocarbon biphenyl by a sulfate-reducing enrichment culture

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21 January 2018

Combined genomic and proteomic approaches identify gene clusters involved in anaerobic 2-methylnaphthalene degradation in the sulfate-reducing enrichment culture N47.

1 reference

https://api.crossref.org/works/10.1007%2FS00253-012-4025-0

21 January 2018

Achievements and new knowledge unraveled by metagenomic approaches

1 reference

https://api.crossref.org/works/10.1007%2FS00253-012-4025-0

21 January 2018

Metagenomic analyses: past and future trends

1 reference

https://api.crossref.org/works/10.1007%2FS00253-012-4025-0

21 January 2018

Metagenomic comparison of microbial communities inhabiting confined and unconfined aquifer ecosystems.

1 reference

https://api.crossref.org/works/10.1007%2FS00253-012-4025-0

21 January 2018

Genetic diversity of benzoyl coenzyme A reductase genes detected in denitrifying isolates and estuarine sediment communities

1 reference

https://api.crossref.org/works/10.1007%2FS00253-012-4025-0

21 January 2018

Molecular diversity and distribution of aromatic hydrocarbon-degrading anaerobes across a landfill leachate plume

1 reference

https://api.crossref.org/works/10.1007%2FS00253-012-4025-0

21 January 2018

Matching phylogeny and metabolism in the uncultured marine bacteria, one cell at a time

1 reference

https://api.crossref.org/works/10.1007%2FS00253-012-4025-0

21 January 2018

Deciphering the evolution and metabolism of an anammox bacterium from a community genome

1 reference

https://api.crossref.org/works/10.1007%2FS00253-012-4025-0

21 January 2018

Microorganisms involved in anaerobic phenol degradation in the treatment of synthetic coke-oven wastewater detected by RNA stable-isotope probing

1 reference

https://api.crossref.org/works/10.1007%2FS00253-012-4025-0

21 January 2018

Diversity of five anaerobic toluene-degrading microbial communities investigated using stable isotope probing.

1 reference

https://api.crossref.org/works/10.1007%2FS00253-012-4025-0

21 January 2018

Metagenomic analysis of DNA viruses in a wastewater treatment plant in tropical climate

1 reference

https://api.crossref.org/works/10.1007%2FS00253-012-4025-0

21 January 2018

Exploring the limits of robust detection of incorporation of 13C by mass spectrometry in protein-based stable isotope probing (protein-SIP).

1 reference

https://api.crossref.org/works/10.1007%2FS00253-012-4025-0

21 January 2018

The human microbiome project

1 reference

https://api.crossref.org/works/10.1007%2FS00253-012-4025-0

21 January 2018

Genome-directed isolation of the key nitrogen fixer Leptospirillum ferrodiazotrophum sp. nov. from an acidophilic microbial community

1 reference

https://api.crossref.org/works/10.1007%2FS00253-012-4025-0

21 January 2018

DNA-based stable isotope probing: a link between community structure and function.

1 reference

https://api.crossref.org/works/10.1007%2FS00253-012-4025-0

21 January 2018

Physiological and molecular characterization of anaerobic benzene-degrading mixed cultures

1 reference

https://api.crossref.org/works/10.1007%2FS00253-012-4025-0

21 January 2018

Systems biology: Functional analysis of natural microbial consortia using community proteomics

1 reference

https://api.crossref.org/works/10.1007%2FS00253-012-4025-0

21 January 2018

Benzene oxidation under sulfate-reducing conditions in columns simulating in situ conditions.

1 reference

https://api.crossref.org/works/10.1007%2FS00253-012-4025-0

21 January 2018

Evaluation of toluene degradation pathways by two-dimensional stable isotope fractionation

1 reference

https://api.crossref.org/works/10.1007%2FS00253-012-4025-0

21 January 2018

Anaerobic benzene degradation by bacteria

1 reference

https://api.crossref.org/works/10.1007%2FS00253-012-4025-0

21 January 2018

Naive Bayesian classifier for rapid assignment of rRNA sequences into the new bacterial taxonomy

1 reference

https://api.crossref.org/works/10.1007%2FS00253-012-4025-0

21 January 2018

Past, present and future applications of flow cytometry in aquatic microbiology

1 reference

https://api.crossref.org/works/10.1007%2FS00253-012-4025-0

21 January 2018

Building on basic metagenomics with complementary technologies

1 reference

https://api.crossref.org/works/10.1007%2FS00253-012-4025-0

21 January 2018

Metagenomic and functional analysis of hindgut microbiota of a wood-feeding higher termite

1 reference

https://api.crossref.org/works/10.1007%2FS00253-012-4025-0

21 January 2018

Identification and expression of benzylsuccinate synthase genes in a toluene-degrading methanogenic consortium

1 reference

https://api.crossref.org/works/10.1007%2FS00253-012-4025-0

21 January 2018

A strictly anaerobic betaproteobacterium Georgfuchsia toluolica gen. nov., sp. nov. degrades aromatic compounds with Fe(III), Mn(IV) or nitrate as an electron acceptor

1 reference

https://api.crossref.org/works/10.1007%2FS00253-012-4025-0

21 January 2018

Biodegradation in contaminated aquifers: incorporating microbial/molecular methods

1 reference

https://api.crossref.org/works/10.1007%2FS00253-012-4025-0

21 January 2018

Unlocking the 'microbial black box' using RNA-based stable isotope probing technologies.

1 reference

https://api.crossref.org/works/10.1007%2FS00253-012-4025-0

21 January 2018

Proteogenomic monitoring of Geobacter physiology during stimulated uranium bioremediation

1 reference

https://api.crossref.org/works/10.1007%2FS00253-012-4025-0

21 January 2018

Microbial community proteomics: elucidating the catalysts and metabolic mechanisms that drive the Earth's biogeochemical cycles

1 reference

https://api.crossref.org/works/10.1007%2FS00253-012-4025-0

21 January 2018

Detection of anaerobic toluene and hydrocarbon degraders in contaminated aquifers using benzylsuccinate synthase (bssA) genes as a functional marker

1 reference

https://api.crossref.org/works/10.1007%2FS00253-012-4025-0

21 January 2018

Depth-resolved quantification of anaerobic toluene degraders and aquifer microbial community patterns in distinct redox zones of a tar oil contaminant plume.

1 reference

https://api.crossref.org/works/10.1007%2FS00253-012-4025-0

21 January 2018

DNA-SIP identifies sulfate-reducing Clostridia as important toluene degraders in tar-oil-contaminated aquifer sediment

1 reference

https://api.crossref.org/works/10.1007%2FS00253-012-4025-0

21 January 2018

Gene clusters involved in anaerobic benzoate degradation of Geobacter metallireducens.

1 reference

https://api.crossref.org/works/10.1007%2FS00253-012-4025-0

21 January 2018

One bacterial cell, one complete genome

1 reference

https://api.crossref.org/works/10.1007%2FS00253-012-4025-0

21 January 2018

Subsurface cycling of nitrogen and anaerobic aromatic hydrocarbon biodegradation revealed by nucleic Acid and metabolic biomarkers

1 reference

https://api.crossref.org/works/10.1007%2FS00253-012-4025-0

21 January 2018

Alkane degradation under anoxic conditions by a nitrate-reducing bacterium with possible involvement of the electron acceptor in substrate activation

1 reference

https://api.crossref.org/works/10.1007%2FS00253-012-4025-0

21 January 2018

Microbial consortia involved in the anaerobic degradation of hydrocarbons

1 reference

https://api.crossref.org/works/10.1007%2FS00253-012-4025-0

21 January 2018

Petroleum hydrocarbon mineralization in anaerobic laboratory aquifer columns

1 reference

https://api.crossref.org/works/10.1007%2FS00253-012-4025-0

21 January 2018

Identifiers

10.1007/S00253-012-4025-0

1 reference

Europe PubMed Central

PubMed publication ID

31 July 2017

Dimensions Publication ID

0 references

PubMed publication ID

1 reference

Europe PubMed Central

PubMed publication ID

31 July 2017

ResearchGate publication ID

0 references

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