Plants

31 pages, 1618 KiB

Open AccessArticle

Exploring Novel Genomic Loci and Candidate Genes Associated with Plant Height in Bulgarian Bread Wheat via Multi-Model GWAS

by Tania Kartseva, Vladimir Aleksandrov, Ahmad M. Alqudah, Matías Schierenbeck, Krasimira Tasheva, Andreas Börner and Svetlana Misheva

Plants 2024, 13(19), 2775; https://doi.org/10.3390/plants13192775 (registering DOI) - 3 Oct 2024

Abstract

In the context of crop breeding, plant height (PH) plays a pivotal role in determining straw and grain yield. Although extensive research has explored the genetic control of PH in wheat, there remains an opportunity for further advancements by integrating genomics with growth-related [...] Read more.

In the context of crop breeding, plant height (PH) plays a pivotal role in determining straw and grain yield. Although extensive research has explored the genetic control of PH in wheat, there remains an opportunity for further advancements by integrating genomics with growth-related phenomics. Our study utilizes the latest genome-wide association scan (GWAS) techniques to unravel the genetic basis of temporal variation in PH across 179 Bulgarian bread wheat accessions, including landraces, tall historical, and semi-dwarf modern varieties. A GWAS was performed with phenotypic data from three growing seasons, the calculated best linear unbiased estimators, and the leveraging genotypic information from the 25K Infinium iSelect array, using three statistical methods (MLM, FarmCPU, and BLINK). Twenty-five quantitative trait loci (QTL) associated with PH were identified across fourteen chromosomes, encompassing 21 environmentally stable quantitative trait nucleotides (QTNs), and four haplotype blocks. Certain loci (17) on chromosomes 1A, 1B, 1D, 2A, 2D, 3A, 3B, 4A, 5B, 5D, and 6A remain unlinked to any known Rht (Reduced height) genes, QTL, or GWAS loci associated with PH, and represent novel regions of potential breeding significance. Notably, these loci exhibit varying effects on PH, contribute significantly to natural variance, and are expressed during seedling to reproductive stages. The haplotype block on chromosome 6A contains five QTN loci associated with reduced height and two loci promoting height. This configuration suggests a substantial impact on natural variation and holds promise for accurate marker-assisted selection. The potentially novel genomic regions harbor putative candidate gene coding for glutamine synthetase, gibberellin 2-oxidase, auxin response factor, ethylene-responsive transcription factor, and nitric oxide synthase; cell cycle-related genes, encoding cyclin, regulator of chromosome condensation (RCC1) protein, katanin p60 ATPase-containing subunit, and expansins; genes implicated in stem mechanical strength and defense mechanisms, as well as gene regulators such as transcription factors and protein kinases. These findings enrich the pool of semi-dwarfing gene resources, providing the potential to further optimize PH, improve lodging resistance, and achieve higher grain yields in bread wheat. Full article

(This article belongs to the Special Issue Biotechnological Advances for Crop Improvement and Sustainable Agriculture)

17 pages, 2163 KiB

Open AccessArticle

Distribution of Non-Structural Carbohydrates and Root Structure of Plantago lanceolata L. under Different Defoliation Frequencies and Intensities

by Verónica M. Merino, René I. Aguilar, M. Jordana Rivero, Iván P. Ordóñez, Luis F. Piña, María Dolores López-Belchí, Mauricio I. Schoebitz, Felipe A. Noriega, Claudia I. Pérez, Andrew S. Cooke and Lubia M. Guedes

Plants 2024, 13(19), 2773; https://doi.org/10.3390/plants13192773 (registering DOI) - 3 Oct 2024

Abstract

Plantago lanceolata L. (plantain) increases herbage dry matter (DM) production and quality during warm and dry conditions due to its deep roots and drought tolerance and reduces nitrogen losses in grazing systems compared to traditional pastures. However, plantain density usually declines after the [...] Read more.

Plantago lanceolata L. (plantain) increases herbage dry matter (DM) production and quality during warm and dry conditions due to its deep roots and drought tolerance and reduces nitrogen losses in grazing systems compared to traditional pastures. However, plantain density usually declines after the third growing season, mainly due to defoliation management. The effects of defoliation frequency and intensity on water-soluble carbohydrate (WSC) reserves and below-ground plant responses need further research to optimize grazing strategies for improved productivity and sustainability of grazing systems. Our study investigated the effects of defoliation frequencies (15, 25, and 35 cm of extended leaf length, ELL) and intensities (5 and 8 cm of residual heights) on morphological traits and WSC concentrations in plantain biomass under controlled environmental conditions. Defoliation frequency significantly influenced morphological and chemical characteristics and biomass distribution more than residual height. Less frequent defoliations promoted above-ground herbage DM production, reproductive stems, and root biomass. Root architecture showed adaptations in response to defoliation frequency, optimizing resource acquisition efficiency. Frequent defoliation reduced high molecular weight WSC concentrations in leaves, affecting regrowth capacity and DM mass. A defoliation frequency of 25 cm ELL (~15 days) balances herbage production and root development, promoting long-term pasture sustainability. Full article

(This article belongs to the Section Plant Development and Morphogenesis)

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15 pages, 1786 KiB

Open AccessArticle

Organizing the Chaos: Novel Insights into the Regulation of Z-3-Hexenal Production in Damaged Maize Leaves

by Samantha Selman, Marie Engelberth and Jurgen Engelberth

Plants 2024, 13(19), 2772; https://doi.org/10.3390/plants13192772 (registering DOI) - 3 Oct 2024

Abstract

Green leaf volatiles (GLVs) are important signaling compounds that help to regulate plant defenses against pests and pathogens. Made through the hydroperoxide lyase (HPL) pathway, they are rapidly produced upon damage and can signal to other parts of the same plant or even [...] Read more.

Green leaf volatiles (GLVs) are important signaling compounds that help to regulate plant defenses against pests and pathogens. Made through the hydroperoxide lyase (HPL) pathway, they are rapidly produced upon damage and can signal to other parts of the same plant or even plants nearby, where they can induce rapid defense responses directly or prime them against impending danger. In this primed state, plants can respond faster and/or stronger should pests or pathogens attack. However, while all proteins and genes involved in the biosynthesis of GLVs have been identified, little is still known about how the first two steps in the pathway, e.g., oxygenation by a lipoxygenase (LOX) and subsequent cleavage by HPL, are facilitated within the damaged tissue, resulting in the production of Z-3-hexenal (Z3al) as the first committed product of the pathway. Here, we provide evidence that several factors might be involved in the production of Z3al, including pH, Ca²⁺, and an environment that is highly hydrophobic. We present a model in which the extraordinary circumstances that are present at the site of Z3al production are considered, and shine new light on potential regulatory mechanisms. Full article

(This article belongs to the Section Plant Protection and Biotic Interactions)

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12 pages, 3309 KiB

Open AccessArticle

Assessing the Role of AtGRP7 Arginine 141, a Target of Dimethylation by PRMT5, in Flowering Time Control and Stress Response

by Alexander Steffen, Katarzyna Dombert, María José Iglesias, Christine Nolte, María José de Leone, Marcelo J. Yanovsky, Julieta L. Mateos and Dorothee Staiger

Plants 2024, 13(19), 2771; https://doi.org/10.3390/plants13192771 (registering DOI) - 3 Oct 2024

Abstract

PROTEIN ARGININE METHYLTRANSFERASES (PRMTs) catalyze arginine (R) methylation that is critical for transcriptional and post-transcriptional gene regulation. In Arabidopsis, PRMT5 that catalyzes symmetric R dimethylation is best characterized. PRMT5 mutants are late-flowering and show altered responses to environmental stress. Among PRMT5 targets are [...] Read more.

PROTEIN ARGININE METHYLTRANSFERASES (PRMTs) catalyze arginine (R) methylation that is critical for transcriptional and post-transcriptional gene regulation. In Arabidopsis, PRMT5 that catalyzes symmetric R dimethylation is best characterized. PRMT5 mutants are late-flowering and show altered responses to environmental stress. Among PRMT5 targets are Arabidopsis thaliana GLYCINE RICH RNA BINDING PROTEIN 7 (AtGRP7) and AtGRP8 that promote the transition to flowering. AtGRP7 R141 has been shown to be modified by PRMT5. Here, we tested whether this symmetric dimethylation of R141 is important for AtGRP7’s physiological role in flowering time control. We constructed AtGRP7 mutant variants with non-methylable R141 (R141A, R141K). Genomic clones containing these variants complemented the late-flowering phenotype of the grp7-1 mutant to the same extent as wild-type AtGRP7. Furthermore, overexpression of AtGRP7 R141A or R141K promoted flowering similar to overexpression of the wild-type protein. Thus, flowering time does not depend on R141 and its modification. However, germination experiments showed that R141 contributes to the activity of AtGRP7 in response to abiotic stress reactions mediated by abscisic acid during early development. Immunoprecipitation of AtGRP7-GFP in the prmt5 background revealed that antibodies against dimethylated arginine still recognized AtGRP7, suggesting that additional methyltransferases may be responsible for modification of AtGRP7. Full article

(This article belongs to the Special Issue Plant Floral Induction Mechanisms and Molecular Genetics with Developmental Plasticity)

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11 pages, 813 KiB

Open AccessArticle

Extraction and Concentration of Spirulina Water-Soluble Metabolites by Ultrafiltration

by Claudia Salazar-González, Carolina Mendoza Ramos, Hugo A. Martínez-Correa and Hugo Fabián Lobatón García

Plants 2024, 13(19), 2770; https://doi.org/10.3390/plants13192770 - 3 Oct 2024

Viewed by 68

Abstract

Spirulina (Arthospira platensis) is known for its rich content of natural compounds like phycocyanin, chlorophylls, carotenoids, and high protein levels, making it a nutrient-dense food. Over the past decade, research has aimed to optimize the extraction, separation, and purification of these [...] Read more.

Spirulina (Arthospira platensis) is known for its rich content of natural compounds like phycocyanin, chlorophylls, carotenoids, and high protein levels, making it a nutrient-dense food. Over the past decade, research has aimed to optimize the extraction, separation, and purification of these valuable metabolites, focusing on technologies such as high-pressure processing, ultrasound-assisted extraction, and microwave-assisted extraction as well as enzymatic treatments, chromatographic precipitation, and membrane separation. In this study, various extraction methods (conventional vs. ultrasound-assisted), solvents (water vs. phosphate buffer), solvent-to-biomass ratios (1:5 vs. 1:10), and ultrafiltration (PES membrane of MWCO 3 kDa, 2 bar) were evaluated. The quantities of total protein, phycocyanin (PC), chlorophyll a (Cla), and total carotenoids (TCC) were measured. The results showed that ultrasound-assisted extraction (UAE) with phosphate buffer at a 1:10 ratio yielded a metabolite-rich retentate (MRR) with 37.0 ± 1.9 mg/g of PC, 617 ± 15 mg/g of protein, 0.4 ± 0.2 mg/g of Cla, and 0.15 ± 0.14 mg/g of TCC. Water extraction in the concentration process achieved the highest concentrations in MRR, with approximately 76% PC, 92% total protein, 62% Cla, and 41% TCC. These findings highlight the effective extraction and concentration processes to obtain a metabolite-rich retentate from Spirulina biomass, reducing the volume tenfold and showing potential as a functional ingredient for the food, cosmetic, and pharmaceutical industries. Full article

(This article belongs to the Special Issue Microalgae Photobiology, Biotechnology, and Bioproduction)

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14 pages, 7238 KiB

Open AccessArticle

Generic and Specific Models for Volume Estimation in Forest and Savanna Phytophysiognomies in Brazilian Cerrado

by Yanara Ferreira de Souza, Eder Pereira Miguel, Adriano José Nogueira Lima, Álvaro Nogueira de Souza, Eraldo Aparecido Trondoli Matricardi, Alba Valéria Rezende, Joberto Veloso de Freitas, Hallefy Junio de Souza, Kennedy Nunes Oliveira, Maria de Fátima de Brito Lima and Leonardo Job Biali

Plants 2024, 13(19), 2769; https://doi.org/10.3390/plants13192769 - 3 Oct 2024

Viewed by 180

Abstract

The Cerrado has high plant and vertebrate diversity and is an important biome for conserving species and provisioning ecosystem services. Volume equations in this biome are scarce because of their size and physiognomic diversity. This study was conducted to develop specific volumetric models [...] Read more.

The Cerrado has high plant and vertebrate diversity and is an important biome for conserving species and provisioning ecosystem services. Volume equations in this biome are scarce because of their size and physiognomic diversity. This study was conducted to develop specific volumetric models for the phytophysiognomies Gallery Forest, Dry Forest, Forest Savannah, and Savannah Woodland, a generic model and a model for Cerrado forest formation. Twelve 10 m × 10 m (100 m²) (National Forest Inventory) plots were used for each phytophysiognomy at different sites (regions) of the Federal District (FD) where trees had a diameter at breast height (DBH; 1.30 m) ≥5 cm in forest formations and a diameter at base height (Db; 0.30 m) ≥5 cm in savanna formations. Their diameters and heights were measured, they were cut and cubed, and the volume of each tree was obtained according to the Smalian methodology. Linear and nonlinear models were adjusted. Criteria for the selection of models were determined using correlation coefficients, the standard error of the estimates, and a graphical analysis of the residues. They were later validated by the chi-square test. The resultant models indicated that fit by specific phytophysiognomy was ideal; however, the generic and forest formation models exhibited similar performance to specific models and could be used in extensive areas of the Cerrado, where they represent a high potential for generalization. To further increase our understanding, similar research is recommended for the development of specific and generic models of the total volume in Cerrado areas. Full article

(This article belongs to the Collection Modeling Impacts of Changing Environmental Conditions on Plant Growth)

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20 pages, 1093 KiB

Open AccessReview

Geminiviruses and Food Security: A Molecular Genetics Perspective for Sustainable Agriculture in Africa

by Minenhle Felicia Zenda, Priscilla Masamba, Farhahna Allie and Abidemi Paul Kappo

Plants 2024, 13(19), 2768; https://doi.org/10.3390/plants13192768 - 2 Oct 2024

Viewed by 257

Abstract

The African continent is vulnerable to food insecurity. Increased food costs, job losses, and climate change force Africans to chronic hunger. Biotechnology can be used to mitigate this by using techniques such as CRISPR/Cas9 systems, TALENs, and ZFNs. Biotechnology can utilize geminiviruses to [...] Read more.

The African continent is vulnerable to food insecurity. Increased food costs, job losses, and climate change force Africans to chronic hunger. Biotechnology can be used to mitigate this by using techniques such as CRISPR/Cas9 systems, TALENs, and ZFNs. Biotechnology can utilize geminiviruses to deliver the necessary reagents for precise genome alteration. Additionally, plants infected with geminiviruses can withstand harsher weather conditions such as drought. Therefore, this article discusses geminivirus replication and its use as beneficial plant DNA viruses. It focuses explicitly on genome editing to increase plant resistance by manipulating plants’ salicylic acid and jasmonic acid pathways. Full article

(This article belongs to the Special Issue Biology and Current–Prospective Methods for the Detection and Management of Plant Pathogens for Sustainable Agriculture)

16 pages, 12018 KiB

Open AccessArticle

Optimizing Sugarcane Clonal Propagation In Vitro by Using Calcium Ammonium Nitrate and Ammonium Sulfate

by Yuanli Wu, Faisal Mehdi, Zhengying Cao, Yimei Gan, Shuting Jiang, Limei Zan, Shuzhen Zhang and Benpeng Yang

Plants 2024, 13(19), 2767; https://doi.org/10.3390/plants13192767 - 2 Oct 2024

Viewed by 274

Abstract

To replace explosive nitrate-based chemicals in MS medium, this study developed a new, safer, and more cost-effective method using fertilizer-grade calcium ammonium nitrate and ammonium sulfate. This approach replaces ammonium nitrate and potassium nitrate, ensuring both safety and cost efficiency for sugarcane propagation. [...] Read more.

To replace explosive nitrate-based chemicals in MS medium, this study developed a new, safer, and more cost-effective method using fertilizer-grade calcium ammonium nitrate and ammonium sulfate. This approach replaces ammonium nitrate and potassium nitrate, ensuring both safety and cost efficiency for sugarcane propagation. Six local sugarcane varieties—Zhongtang1 (ZT1), Zhongtang3 (ZT3), Zhongtang6 (ZT6), Guitang42 (GT42), Guitang44 (GT44), and Guiliu 07150 (GT07150)—were used. In the control group (Ck), nitrate ions (NO₃⁻) were 39.28 mM, and ammonium ions (NH₄⁺) were 20.49 mM, with a 2:1 ratio. In the treatment groups, the concentrations of nitrate ions (NO₃⁻) and ammonium ions (NH₄⁺) included treatment 1 (19.69 mM NO₃⁻ and 10.3 mM NH₄⁺), treatment 2 (29.54 mM and 15.44 mM), treatment 3 (39.38 mM and 20.59 mM), treatment 4 (49.225 mM and 25.74 mM), treatment 5 (59.07 mM and 30.89 mM), and treatment 6 (68.915 mM and 36.03 mM), respectively, all with the same 2:1 ratio. Fifty bottles per treatment, with three replicates, were used for each sugarcane plantlets treatment. After five subcultures, the optimal ratio was determined by assessing morphological and physiological parameters, nitrogen levels, and SOD enzyme activity. The results indicated that treatment 3 (39.38 mM and 20.59 mM) and treatment 4 (49.225 mM and 25.74 mM) had the best morphological and physiological indicators. The optimal doses of calcium ammonium nitrate and ammonium sulfate were found in treatments 3 and 4, as well as in the control, with no significant difference among them. However, treatment 3, due to its lower dose, was more cost effective. To improve cost efficiency in practical production, it is recommended to use the lower concentration ratio of treatment 3 for plant tissue culture plantlets. Full article

(This article belongs to the Section Plant Development and Morphogenesis)

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12 pages, 1378 KiB

Open AccessArticle

Callose and Salicylic Acid Are Key Determinants of Strigolactone-Mediated Disease Resistance in Arabidopsis

by Xiaosheng Zhao, Qiuping Liu and Leitao Tan

Plants 2024, 13(19), 2766; https://doi.org/10.3390/plants13192766 - 2 Oct 2024

Viewed by 288

Abstract

Research has demonstrated that strigolactones (SLs) mediate plant disease resistance; however, the basal mechanism is unclear. Here, we provide key genetic evidence supporting how SLs mediate plant disease resistance. Exogenous application of the SL analog, rac-GR24, increased Arabidopsis thaliana resistance to virulent [...] Read more.

Research has demonstrated that strigolactones (SLs) mediate plant disease resistance; however, the basal mechanism is unclear. Here, we provide key genetic evidence supporting how SLs mediate plant disease resistance. Exogenous application of the SL analog, rac-GR24, increased Arabidopsis thaliana resistance to virulent Pseudomonas syringae. SL-biosynthetic mutants and overexpression lines of more axillary growth 1 (MAX1, an SL-biosynthetic gene) enhanced and reduced bacterial susceptibility, respectively. In addition, rac-GR24 promoted bacterial pattern flg22-induced callose deposition and hydrogen peroxide production. SL-biosynthetic mutants displayed reduced callose deposition but not hydrogen peroxide production under flg22 treatment. Moreover, rac-GR24 did not affect avirulent effector-induced cell death between Col-0 and SL-biosynthetic mutants. Furthermore, rac-GR24 increased the free salicylic acid (SA) content and significantly promoted the expression of pathogenesis-related gene 1 related to SA signaling. Importantly, rac-GR24- and MAX1-induced bacterial resistance disappeared completely in Arabidopsis plants lacking both callose synthase and SA. Taken together, our data revealed that callose and SA are two important determinants in SL-mediated plant disease resistance, at least in Arabidopsis. Full article

(This article belongs to the Section Plant Physiology and Metabolism)

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18 pages, 3892 KiB

Open AccessArticle

Differential Drought Responses of Soybean Genotypes in Relation to Photosynthesis and Growth-Yield Attributes

by Md. Saddam Hossain, Md. Arifur Rahman Khan, Apple Mahmud, Uttam Kumar Ghosh, Touhidur Rahman Anik, Daniel Mayer, Ashim Kumar Das and Mohammad Golam Mostofa

Plants 2024, 13(19), 2765; https://doi.org/10.3390/plants13192765 - 2 Oct 2024

Viewed by 222

Abstract

Water scarcity leads to significant ecological challenges for global farming production. Sustainable agriculture depends on developing strategies to overcome the impacts of drought on important crops, including soybean. In this present study, seven promising soybean genotypes were evaluated for their drought tolerance potential [...] Read more.

Water scarcity leads to significant ecological challenges for global farming production. Sustainable agriculture depends on developing strategies to overcome the impacts of drought on important crops, including soybean. In this present study, seven promising soybean genotypes were evaluated for their drought tolerance potential by exposing them to water deficit conditions. The control group was maintained at 100% field capacity (FC), while the drought-treated group was maintained at 50% FC on a volume/weight basis. This treatment was applied at the second trifoliate leaf stage and continued until maturity. Our results demonstrated that water shortage exerted negative impacts on soybean phenotypic traits, physiological and biochemical mechanisms, and yield output in comparison with normal conditions. Our results showed that genotype G00001 exhibited the highest leaf area plant⁻¹ (483.70 cm²), photosynthetic attributes like stomatal conductance (gs) (0.15 mol H₂O m⁻² s⁻¹) and photosynthetic rate (Pn) (13.73 μmol CO₂ m⁻² s⁻¹), and xylem exudation rate (0.25 g h⁻¹) under drought conditions. The G00001 genotype showed greater leaf greenness by preserving photosynthetic pigments (total chlorophylls (Chls) and carotenoids; 4.23 and 7.34 mg g⁻¹ FW, respectively) in response to drought conditions. Soybean plants accumulated high levels of stress indicators like proline and malondialdehyde when subjected to drought stress. However, genotype G00001 displayed lower levels of proline (4.49 μg g⁻¹ FW) and malondialdehyde (3.70 μmol g⁻¹ FW), indicating that this genotype suffered from less oxidative stress induced by drought stress compared to the other investigated soybean genotypes. Eventually, the G00001 genotype had a greater yield in terms of seeds pod⁻¹ (SP) (1.90) and 100-seed weight (HSW) (14.60 g) under drought conditions. On the other hand, BD2333 exhibited the largest decrease in plant height (37.10%), pod number plant⁻¹ (85.90%), SP (56.20%), HSW (54.20%), gs (90.50%), Pn (71.00%), transpiration rate (59.40%), relative water content (34.40%), Chl a (79.50%), total Chls (72.70%), and carotenoids (56.70%), along with the maximum increase in water saturation deficit (290.40%) and malondialdehyde content (280.30%) under drought compared to control conditions, indicating its higher sensitivity to drought stress. Our findings suggest that G00001 is a promising candidate to consider for field trials and further evaluation of its molecular signature may help breeding other elite cultivars to develop drought-tolerant, high-yielding soybean varieties. Full article

(This article belongs to the Special Issue Drought Responses and Adaptation Mechanisms in Plants)

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16 pages, 5498 KiB

Open AccessArticle

Some Nutritional Value Aspects of Barley and Oat and Their Impact in Human Nutrition and Healthy Life

by Diana Camelia Batîr Rusu, Danela Murariu, Roxana Gheorghita and Mariana Graur

Plants 2024, 13(19), 2764; https://doi.org/10.3390/plants13192764 - 2 Oct 2024

Viewed by 249

Abstract

Nowadays, there is a general concern regarding the increasing global talk about functional foods that respond to our demands and needs as consumers in order to maintain health and body weight through a correctly balanced diet. Cereals are key elements of nutrition and [...] Read more.

Nowadays, there is a general concern regarding the increasing global talk about functional foods that respond to our demands and needs as consumers in order to maintain health and body weight through a correctly balanced diet. Cereals are key elements of nutrition and a healthy diet, and they also play a significant role in health promotion due to the useful nutrient content. Therefore, this work aims to identify barley and oat genotypes suitable for human nutrition and to achieve practical results for their widespread use in preventing or treating certain chronic diseases by analyzing the nutritional and physical properties of 52 genotypes of oat and barley conserved in Suceava Gene Bank, Romania. The first part of this manuscript is the presentation of these accessions and the evaluation of their most important properties. For oat and barley cultivars, detailed processing was carried out, involving the computation of variation amplitude, coefficients of correlation and cluster analyses, both for biochemical (protein, lysine and tryptophan contents) and physical (test weight and seed weight) properties. The results indicated high variability between oat and barley varieties. Thus, according to the results, the 26 varieties of oat exhibited almost double the content of lysine compared to barley seeds, while tryptophan had higher values in barley than in oat seeds. Overall, both species play an essential role in human nutrition, barley being important because of its high protein content and higher productivity compared to oats, which, although not as productive, have better quality seeds due to their higher lysine content. The results presented are not only of scientific interest but also have practical implications for agriculture, food safety, nutrition and human health. The documented information will facilitate new studies needed to contribute to improving human nutrition and health. Full article

(This article belongs to the Special Issue Plants as a Novel Dietary Supplement and Medicine)

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25 pages, 6708 KiB

Open AccessArticle

Analysis of Main Components of Five Mulberry Varieties in Tropics

by Dezhao Lou, Huazhou Wu, Hongxian Wei, Fuping Lu, Tao Geng, Peiqun Lin and Shuchang Wang

Plants 2024, 13(19), 2763; https://doi.org/10.3390/plants13192763 - 1 Oct 2024

Viewed by 370

Abstract

Mulberries (Morus alba L.) contain rich and beneficial nutrients for human health. However, as a temperate adaptive species, high-temperature and high-humidity climate conditions may alter the main nutritional value of mulberries after their intended arrival in tropical regions, which has not yet [...] Read more.

Mulberries (Morus alba L.) contain rich and beneficial nutrients for human health. However, as a temperate adaptive species, high-temperature and high-humidity climate conditions may alter the main nutritional value of mulberries after their intended arrival in tropical regions, which has not yet been reported on. In this study, we analyzed the differences in morphology, sugars, organic acids, free amino acids, and aroma contents of five mulberry varieties in the tropics between two harvesting periods. The results show that the full-ripe fruits of M. laevigata W (TLM) have the longest fruit length (83.67 mm) and highest brix (25.90); meanwhile, full-ripe fruits of M. atropurpurea R (D10M) have the longest fruit transverse stem (20.00 ± 0.577 mm) and single-fruit weight (9.63 ± 0.033 g). Fructose, glucose, and sucrose were the main sugars, and oxalic acid, quinic acid, malic acid, and citric acid were the main organic acids in all varieties; in addition, the sucrose content in mature fruits of M. laevigata W. (BLM) and M. alba L. BZZ (BZM) was significantly higher than other sugars. Twenty free amino acids were detected in all five varieties and asparagine was the main free amino acid. A total of 100 volatile compounds were identified, including 31 esters, 20 aldehydes, 14 hydrocarbons, 11 alcohols, 10 acids, 6 ketones, and 8 others. Although the main components of five mulberry full-ripe fruits were significantly higher than the green-ripe fruits, gamma-amino butyric acid and a few other components were otherwise. The research results show that the tropical climate conditions could increase the main nutritional components of mulberries, but the specific molecular regulatory mechanisms need to be further analyzed. Full article

(This article belongs to the Section Phytochemistry)

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49 pages, 5210 KiB

Open AccessReview

Agricultural Pest Management: The Role of Microorganisms in Biopesticides and Soil Bioremediation

by Alane Beatriz Vermelho, Jean Vinícius Moreira, Ingrid Teixeira Akamine, Veronica S. Cardoso and Felipe R. P. Mansoldo

Plants 2024, 13(19), 2762; https://doi.org/10.3390/plants13192762 - 1 Oct 2024

Viewed by 915

Abstract

Pesticide use in crops is a severe problem in some countries. Each country has its legislation for use, but they differ in the degree of tolerance for these broadly toxic products. Several synthetic pesticides can cause air, soil, and water pollution, contaminating the [...] Read more.

Pesticide use in crops is a severe problem in some countries. Each country has its legislation for use, but they differ in the degree of tolerance for these broadly toxic products. Several synthetic pesticides can cause air, soil, and water pollution, contaminating the human food chain and other living beings. In addition, some of them can accumulate in the environment for an indeterminate amount of time. The agriculture sector must guarantee healthy food with sustainable production using environmentally friendly methods. In this context, biological biopesticides from microbes and plants are a growing green solution for this segment. Several pests attack crops worldwide, including weeds, insects, nematodes, and microorganisms such as fungi, bacteria, and viruses, causing diseases and economic losses. The use of bioproducts from microorganisms, such as microbial biopesticides (MBPs) or microorganisms alone, is a practice and is growing due to the intense research in the world. Mainly, bacteria, fungi, and baculoviruses have been used as sources of biomolecules and secondary metabolites for biopesticide use. Different methods, such as direct soil application, spraying techniques with microorganisms, endotherapy, and seed treatment, are used. Adjuvants like surfactants, protective agents, and carriers improve the system in different formulations. In addition, microorganisms are a tool for the bioremediation of pesticides in the environment. This review summarizes these topics, focusing on the biopesticides of microbial origin. Full article

(This article belongs to the Special Issue Emerging Topics in Botanical Biopesticides—2nd Edition)

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18 pages, 6919 KiB

Open AccessArticle

Behavioral, Physiological, and Molecular Mechanisms Underlying the Adaptation of Helicoverpa armigera to the Fruits of a Marginal Host: Walnut (Juglans regia)

by Haiqiang Li, Xinzheng Huang, Long Yang, Haining Liu, Bing Liu and Yanhui Lu

Plants 2024, 13(19), 2761; https://doi.org/10.3390/plants13192761 - 1 Oct 2024

Viewed by 369

Abstract

In northwest China, changes in cultivation patterns and the scarcity of preferred hosts have forced Helicoverpa armigera to feed on the marginal host walnut (Juglans regia). However, the mechanisms allowing this adaptation remain poorly understood. Here, we investigated the behavioral, physiological, [...] Read more.

In northwest China, changes in cultivation patterns and the scarcity of preferred hosts have forced Helicoverpa armigera to feed on the marginal host walnut (Juglans regia). However, the mechanisms allowing this adaptation remain poorly understood. Here, we investigated the behavioral, physiological, and molecular mechanisms underlying the local adaptation of this pest to walnut fruits. The green husk and shell generally contained higher levels of phytochemicals than the kernel. Bioassays revealed that the phytochemical-rich green husk and shell were less preferred, reduced larval fitness and growth, and elevated the activity of detoxification enzymes compared to the nutrient-rich kernel, which were further supported by a larger number of upregulated detoxification genes in insects fed green husks or shells based on transcriptome sequencing. Together, these data suggest that P450 genes (LOC110371778) may be crucial to H. armigera adaptation to the phytochemicals of walnuts. Our findings provide significant insight into the adaptation of H. armigera to walnut, an alternative host of lower quality. Meanwhile, our study provides a theoretical basis for managing resistance to H. armigera larvae in walnut trees and is instrumental in developing comprehensive integrated pest management strategies for this pest in walnut orchards and other agricultural systems. Full article

(This article belongs to the Special Issue Integrated Pest Management—from Chemicals to Green Management)

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18 pages, 656 KiB

Open AccessReview

Roles of Histone Acetylation and Deacetylation in Root Development

by Christos Tersenidis, Stylianos Poulios, George Komis, Emmanuel Panteris and Konstantinos Vlachonasios

Plants 2024, 13(19), 2760; https://doi.org/10.3390/plants13192760 - 1 Oct 2024

Viewed by 451

Abstract

Roots are usually underground plant organs, responsible for anchoring to the soil, absorbing water and nutrients, and interacting with the rhizosphere. During root development, roots respond to a variety of environmental signals, contributing to plant survival. Histone post-translational modifications play essential roles in [...] Read more.

Roots are usually underground plant organs, responsible for anchoring to the soil, absorbing water and nutrients, and interacting with the rhizosphere. During root development, roots respond to a variety of environmental signals, contributing to plant survival. Histone post-translational modifications play essential roles in gene expression regulation, contributing to plant responses to environmental cues. Histone acetylation is one of the most studied post-translational modifications, regulating numerous genes involved in various biological processes, including development and stress responses. Although the effect of histone acetylation on plant responses to biotic and abiotic stimuli has been extensively reviewed, no recent reviews exist focusing on root development regulation by histone acetylation. Therefore, this review brings together all the knowledge about the impact of histone acetylation on root development in several plant species, mainly focusing on Arabidopsis thaliana. Here, we summarize the role of histone acetylation and deacetylation in numerous aspects of root development, such as stem cell niche maintenance, cell division, expansion and differentiation, and developmental zone determination. We also emphasize the gaps in current knowledge and propose new perspectives for research toward deeply understanding the role of histone acetylation in root development. Full article

(This article belongs to the Special Issue Root Development and Adaptations)

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18 pages, 7825 KiB

Open AccessArticle

Glutamine Synthetase and Glutamate Synthase Family Perform Diverse Physiological Functions in Exogenous Hormones and Abiotic Stress Responses in Pyrus betulifolia Bunge (P.be)

by Weilong Zhang, Shuai Yuan, Na Liu, Haixia Zhang and Yuxing Zhang

Plants 2024, 13(19), 2759; https://doi.org/10.3390/plants13192759 - 1 Oct 2024

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Abstract

The unscientific application of nitrogen (N) fertilizer not only increases the economic input of pear growers but also leads to environmental pollution. Improving plant N use efficiency (NUE) is the most effective economical method to solve the above problems. The absorption and utilization [...] Read more.

The unscientific application of nitrogen (N) fertilizer not only increases the economic input of pear growers but also leads to environmental pollution. Improving plant N use efficiency (NUE) is the most effective economical method to solve the above problems. The absorption and utilization of N by plants is a complicated process. Glutamine synthetase (GS) and glutamate synthase (GOGAT) are crucial for synthesizing glutamate from ammonium in plants. However, their gene family in pears has not been documented. This study identified 29 genes belonging to the GS and GOGAT family in the genomes of Pyrus betulaefolia (P.be, 10 genes), Pyrus pyrifolia (P.py, 9 genes), and Pyrus bretschneideri (P.br, 10 genes). These genes were classified into two GS subgroups (GS1 and GS2) and two GOGAT subgroups (Fd–GOGAT and NADH–GOGAT). The similar exon–intron structures and conserved motifs within each cluster suggest the evolutionary conservation of these genes. Meanwhile, segmental duplication has driven the expansion and evolution of the GS and GOGAT gene families in pear. The tissue–specific expression dynamics of PbeGS and PbeGOGAT genes suggest significant roles in pear growth and development. Cis–acting elements of the GS and GOGAT gene promoters are crucial for plant development, hormonal responses, and stress reactions. Furthermore, qRT–PCR analysis indicated that PbeGSs and PbeGOGATs showed differential expression under exogenous hormones (GA₃, IAA, SA, ABA) and abiotic stress (NO₃⁻ and salt stress). In which, the expression of PbeGS2.2 was up–regulated under hormone treatment and down–regulated under salt stress. Furthermore, physiological experiments demonstrated that GA₃ and IAA promoted GS, Fd–GOGAT, and NADH–GOGAT enzyme activities, as well as the N content. Correlation analysis revealed a significant positive relationship between PbeGS1.1, PbeGS2.2, PbeNADH–GOGATs, and the N content. Therefore, PbeGS1.1, PbeGS2.2, and PbeNADH–GOGATs could be key candidate genes for improving NUE under plant hormone and abiotic stress response. To the best of our knowledge, our study provides valuable biological information about the GS and GOGAT family in the pear for the first time and establishes a foundation for molecular breeding aimed at developing high NUE pear rootstocks. Full article

(This article belongs to the Special Issue Molecular Biology and Bioinformatics of Forest Trees)

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20 pages, 2816 KiB

Open AccessArticle

Phytotoxic Activity of Sesquiterpene Lactones-Enriched Fractions from Cynara cardunculus L. Leaves on Pre-Emergent and Post-Emergent Weed Species and Putative Mode of Action

by Daniela Rosa, Carlos Rial, Teresa Brás, Rosa M. Varela, Francisco A. Macías and Maria F. Duarte

Plants 2024, 13(19), 2758; https://doi.org/10.3390/plants13192758 - 1 Oct 2024

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Abstract

Sesquiterpene lactones (SLs) are compounds that are highly produced in Cynara cardunculus leaves, known for their phytotoxic activity. This study aims to assess SL-enriched fractions’ (cynaropicrin, aguerin B, and grosheimin) phytotoxic potentials and putative modes of action, compared to an initial extract, using [...] Read more.

Sesquiterpene lactones (SLs) are compounds that are highly produced in Cynara cardunculus leaves, known for their phytotoxic activity. This study aims to assess SL-enriched fractions’ (cynaropicrin, aguerin B, and grosheimin) phytotoxic potentials and putative modes of action, compared to an initial extract, using two approaches: first, against a panel of nine weed species in pre-emergence, and then on Portulaca oleracea L.’s post-emergency stage. The SL-enriched fractions demonstrated greater phytotoxic activity when compared with the C. cardunculus leaf initial extract. The SL-enriched fractions had higher activity at root growth inhibition over the panel tested, doubling the activity in five of them at 800 ppm. Regarding the post-emergence bioassay, the SL-enriched fractions had a higher influence on the plants’ growth inhibition (67% at 800 ppm). The SL-effects on the plants’ metabolisms were evidenced. The total chlorophyll content was reduced by 65% at 800 ppm. Oxidative stress induction was observed because of the enhancement in MDA levels at 800 ppm compared to control (52%) and the decrease in SOD-specific activity from 4.20 U/mg protein (400 ppm) to 1.74 U/mg protein (800 ppm). The phytotoxic effects of the SL-enriched fractions suggest that they could be used for a future bioherbicide development. Full article

(This article belongs to the Special Issue Phytochemical and Biological Activity of Plant Extracts)

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17 pages, 3541 KiB

Open AccessArticle

Reduced Fertilization and Magnesium Supplementation: Modulating Fruit Quality in Honey Pomelo (Citrus maxima (Burm.) Merr.)

by Da Su, Yunfei Jiang, Biao Song, Zhaozheng Wu, Xiaojun Yan, Zhiyuan He, Delian Ye, Jie Ou, Yingzhe Zeng and Liangquan Wu

Plants 2024, 13(19), 2757; https://doi.org/10.3390/plants13192757 - 1 Oct 2024

Viewed by 302

Abstract

The excessive use of chemical fertilizers in the Guanxi honey pomelo production area has led to severe soil acidification and magnesium (Mg) deficiency, adversely affecting pomelo fruit quality. To address this issue, an integrated nutrient optimization model crucial for ensuring the sustainable and [...] Read more.

The excessive use of chemical fertilizers in the Guanxi honey pomelo production area has led to severe soil acidification and magnesium (Mg) deficiency, adversely affecting pomelo fruit quality. To address this issue, an integrated nutrient optimization model crucial for ensuring the sustainable and environmentally friendly development of the Guanxi honey pomelo industry has been explored. In a three-year experiment, two fertilizer treatments were implemented: a farmer fertilizer practice (FP) and an NPK reduction plus foliar Mg fertilizer (OPT + fMg). We investigated the impact of this integrated optimized fertilization measure on pomelo fruit quality from three aspects: flavor (sugars and organic acids), nutrition (vitamin C and mineral elements), and antioxidant properties (phenolics, flavonoids, and phytic acid). The results revealed that the OPT + fMg treatment improved fruit flavor by reducing acidity (titratable acid, citric acid, and quinine), while having a minimal impact on sugar components (sucrose, fructose, and glucose). Additionally, the OPT + fMg treatment increased the total phenolics, total flavonoids, and phytic acid in the fruit peel, enhancing its potential antioxidant quality. However, the OPT + fMg treatment reduced the mineral nutrient quality (excluding calcium) in the fruit. As for the fruit developmental period, the OPT + fMg treatment significantly increased the total flavonoid concentration in the peel from the mid-expansion fruit stage, followed by notable increases in phytic acid in the peel during the mid-to-late expansion fruit stage. The total phenolic concentration in the peel significantly rose only during the late fruit development stage. The most pronounced effect was observed on phytic acid in both peel and pulp. The influence of the OPT + fMg treatment on the mineral nutrients (excluding calcium) primarily occurred during the mid-to-late expansion fruit stage. Overall, the OPT + fMg treatment significantly improved the comprehensive nutritional quality of pomelo fruit, providing valuable insights for scientifically reducing fertilizer application while enhancing fruit quality. Full article

(This article belongs to the Special Issue The Bioactivity of Natural Products and Extracts from Horticultural Plants)

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25 pages, 5328 KiB

Open AccessArticle

In Vitro Inhibition of Enzymes and Antioxidant and Chemical Fingerprinting Characteristics of Azara serrata Ruiz & Pav. Fruits, an Endemic Plant of the Valdivian Forest of Chile

by Philipp Hopfstock, Javier Romero-Parra, Peter Winterhalter, Recep Gök and Mario Simirgiotis

Plants 2024, 13(19), 2756; https://doi.org/10.3390/plants13192756 - 30 Sep 2024

Viewed by 283

Abstract

The World Health Organization has emphasized the importance of consuming small fruits for the prevention of chronic health problems, including diabetes, cardiovascular diseases, cancer, and obesity, which are named chronic non-communicable diseases (NCDs). Azara serrata Ruiz & Pav., commonly called “aroma de Castilla”, [...] Read more.

The World Health Organization has emphasized the importance of consuming small fruits for the prevention of chronic health problems, including diabetes, cardiovascular diseases, cancer, and obesity, which are named chronic non-communicable diseases (NCDs). Azara serrata Ruiz & Pav., commonly called “aroma de Castilla”, is a shrub endemic to Chile from the Salicaceae family that produces an underutilized blue-grey berry that grows wild in southern Chile. The species is widely used as a medicinal plant by the Andean communities of southern Chile. In this work, a high-resolution mass spectrometric analysis of the methanolic extract revealed several phenolic compounds for the first time in the edible berry of this endemic species. Furthermore, several glycosylated anthocyanins were detected and quantified using UHPLC coupled with UV/Vis detection and trapped ion mobility mass spectrometry (UHPLC-DAD-TIMS-TOF) for the anthocyanin-rich extract, which was prepared using an optimized anthocyanin extraction protocol. The extract proved to be active in the inhibition of several enzymes linked to NCDs, such as acetylcholinesterase, tyrosinase, amylase, lipase, and glucosidase (IC₅₀ = 3.92 ± 0.23, 12.24 ± 0.03, 11.12 ± 0.10, 32.43 ± 0.0, and 371.6 ± 0.0 μg/mL, respectively). Furthermore, the extract concentrated in anthocyanins showed good antioxidant activity evidenced by the bleaching of the radicals DPPH and ABTS, ferric-reducing antioxidant power (FRAP), and oxygen radical absorbance capacity (ORAC). The results show that these neglected endemic small berries can be a source of healthy phytochemicals. These Chilean berries can be used as functional food and their extracts are candidates for use as functional ingredients in naturally healthy products. Full article

(This article belongs to the Special Issue Phytochemical Characterization and Medicinal Value of Natural Products)

16 pages, 1108 KiB

Open AccessArticle

Response of Plant Endophyte Communities to Heavy Metal Stress and Plant Growth Promotion by the Endophyte Serratia marcescens (Strain JG1)

by Jiayi Liu, Chao Liu, Jiaxin Zheng, Xiaoxia Zhang, Kang Zheng and Jiayao Zhuang

Plants 2024, 13(19), 2755; https://doi.org/10.3390/plants13192755 - 30 Sep 2024

Viewed by 304

Abstract

Effects of heavy metals on soil microbial communities have been extensively studied due to their persistence in the environment and imposed threats to living organisms; however, there is a lack of in-depth studies of the impacts of heavy metals on plant endophyte communities. [...] Read more.

Effects of heavy metals on soil microbial communities have been extensively studied due to their persistence in the environment and imposed threats to living organisms; however, there is a lack of in-depth studies of the impacts of heavy metals on plant endophyte communities. Therefore, the responses of plant endophyte communities to different concentrations of heavy metals were investigated in this study. The endophyte communities of plants existing in severely (W1, Pb, 110.49 mg/kg, Cd, 1.11 mg/kg), moderately (W2, Pb, 55.06 mg/kg, Cd, 0.48 mg/kg), and mildly (W3, Pb, 39.06 mg/kg, Cd, 0.20 mg/kg) contaminated soils were analyzed by 16s rRNA high-throughput Illumina sequencing. Furthermore, networks were constructed to illustrate the relationships between microorganisms and environmental factors. High-quality sequences were clustered at a 97% similarity level. Results revealed that the diversity of the community and relative abundance of Cyanobacteria phylum increased with decreasing levels of pollution. Cyanobacteria and Proteobacteria were found to be the dominant phylum, while Methylobacterium and Sphingomonas were observed as the dominant genus. Tukey’s HSD test showed that the relative abundances of Cyanobacteria and Proteobacteria phyla and Methylobacterium and Sphingomonas genera differed significantly (p < 0.01) among the plants of the three sample sites. Environmental factor analysis revealed a significant negative correlation (p < 0.01) of Cyanobacteria and a significant positive correlation (p < 0.01) of Methylobacterium with the heavy metal content in the environment. These findings suggest that Cyanobacteria and Methylobacterium may be phylum and genus indicators, respectively, of heavy metal toxicity. Tax4Fun analysis showed the effect of heavy metal toxicity on the abundance of genes involved in plant metabolism. In addition, culturable endophytic strains were isolated to study their resistance to heavy metal stress and their ability to promote plant growth. The potting tests showed that the JG1 strain was tolerant to heavy metals, and it could significantly promote the growth of the host plant under stress caused by multiple heavy metals. Compared to the control, the JG1-treated plants showed a 23.14% increase in height and a 12.84% increase in biomass. Moreover, AP, AK, and HN contents in JG1-treated plants were 20.87%, 12.55%, and 9.03% higher, respectively, under heavy metal stress. The results of this study provide a scientific basis for the construction of an efficient plant endophyte restoration system. Full article

(This article belongs to the Special Issue The Transfer of Metal(loid)s in Soil–Plant Systems)

13 pages, 6748 KiB

Open AccessArticle

Species Richness, Abundance, and Vertical Distribution of Epiphytic Bromeliads in Primary Forest and Disturbed Forest

by Sugeidi S. Siaz Torres, Edilia de la Rosa-Manzano, Leonardo U. Arellano-Méndez, Karla M. Aguilar-Dorantes, José Guadalupe Martínez Ávalos and María Cruz Juárez Aragón

Plants 2024, 13(19), 2754; https://doi.org/10.3390/plants13192754 - 30 Sep 2024

Viewed by 392

Abstract

Epiphytes represent a key component in tropical forests. They are affected by anthropogenic and natural disturbances suffered by forests, since they depend on their hosts and the microclimatic conditions they generate. We analyzed differences in abundance, species richness, and vertical distributions of epiphytic [...] Read more.

Epiphytes represent a key component in tropical forests. They are affected by anthropogenic and natural disturbances suffered by forests, since they depend on their hosts and the microclimatic conditions they generate. We analyzed differences in abundance, species richness, and vertical distributions of epiphytic bromeliads in primary and disturbed forests. We found a higher abundance (5316 individuals) and species richness (8 species) of bromeliads in disturbed forest than in primary forest (1360 individuals and 4 species, respectively). Most bromeliads (97%) were found on Taxodium mucronatum, a dominant tree with rough bark in the disturbed forest (gallery forest). Bromeliads were more abundant in the middle of the tree and diminished towards the trunk base and the upper crown. Tillandsia baileyi was the most abundant bromeliad, and the size categories of this species differentially colonize trees in gallery forest according to Johansson zones; seedlings of T. baileyi abundantly colonize the upper canopy, and juveniles colonize the middle canopy or secondary branches. Gallery forest represents an important reservoir for epiphytic bromeliads. Hence, it is important to extend this kind of study to wetland sites to understand the role they play as a habitat for epiphytes, as well as the dynamics and ecological processes that occur in such habitats. Full article

(This article belongs to the Special Issue Epiphytic Plants: Perspective on Their Diversity, Distribution, Systematics and Conservation in the Changing Environment)

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19 pages, 834 KiB

Open AccessArticle

Assessment of Chemical and Biological Fungicides for the Control of Diplodia mutila Causing Wood Necrosis in Hazelnut

by Verónica Retamal, Juan San Martín, Braulio Ruíz, Richard M. Bastías, Eugenio Sanfuentes, María José Lisperguer, Tommaso De Gregorio, Matteo Maspero and Ernesto Moya-Elizondo

Plants 2024, 13(19), 2753; https://doi.org/10.3390/plants13192753 - 30 Sep 2024

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Abstract

Fungal trunk disease (FTD) poses a significant threat to hazelnut (Corylus avellana L.) production worldwide. In Chile, the fungus Diplodia mutila, from the Botryosphaeriaceae family, has been frequently identified causing this disease in the Maule and Ñuble Regions. However, control measures [...] Read more.

Fungal trunk disease (FTD) poses a significant threat to hazelnut (Corylus avellana L.) production worldwide. In Chile, the fungus Diplodia mutila, from the Botryosphaeriaceae family, has been frequently identified causing this disease in the Maule and Ñuble Regions. However, control measures for D. mutila remain limited. This research aimed to evaluate the effectiveness of chemical and biological fungicides against D. mutila under in vitro, controlled pot experiment, and field conditions. An in vitro screening of 30 fungicides was conducted. The effectiveness was assessed by measuring the length of vascular lesions in hazelnut branches inoculated with D. mutila mycelium disks under controlled and field conditions. Field trials were conducted in a hazelnut orchard in Ñiquén, Ñuble Region, Chile. The results showed that three biological and five chemical fungicides were selected in vitro with >31% inhibition after 14 days. In pot experiments, all fungicides reduced necrotic lesions on branches by 32% to 61%. In field experiments, the most effective systemic fungicides were fluopyram/tebuconazole, fluxapyroxad/pyraclostrobin, and tebuconazole, while the effectiveness of antagonists Pseudomonas protegens ChC7 and Bacillus subtilis QST713 varied with seasonal temperatures. Effective conventional and biological fungicides against D. mutila could be integrated into disease management programs to protect hazelnut wounds from infections. Full article

(This article belongs to the Special Issue Pathogens and Disease Management of Horticultural Crops)

23 pages, 10957 KiB

Open AccessArticle

The Influence of Water Deficit on Dehydrin Content in Callus Culture Cells of Scots Pine

by Natalia Korotaeva, Vladimir Shmakov, Vadim Bel’kov, Daria Pyatrikas, Sofia Moldavskaya and Igor Gorbenko

Plants 2024, 13(19), 2752; https://doi.org/10.3390/plants13192752 - 30 Sep 2024

Viewed by 291

Abstract

Under a water deficit, the protective proteins known as dehydrins (DHNs) prevent nonspecific interactions in protein and membrane structures and their damage, in addition to playing an antioxidant role. The DHNs of a widespread xerophytic species Scots pine (Pinus sylvestris L.) have [...] Read more.

Under a water deficit, the protective proteins known as dehydrins (DHNs) prevent nonspecific interactions in protein and membrane structures and their damage, in addition to playing an antioxidant role. The DHNs of a widespread xerophytic species Scots pine (Pinus sylvestris L.) have been poorly studied, and their role in resistance to water deficits has not been revealed. In this paper, we have expanded the list of DHNs that accumulate in the cells of Scots pine under the conditions of water deficits and revealed their relationship with the effects of water deficits. In this investigation, callus cultures of branches and buds of Scots pine were used. A weak water deficit was created by adding polyethylene glycol to the culture medium. Under the conditions of a water deficit, the activity of catalase and peroxidase enzymes increased in the callus cultures. A moderate decrease in the total water content was correlated with a decrease in the growth rate of the callus cultures, as well as with an increase in the activity of lipid peroxidation. The accumulation of Mr 72, 38, and 27 kDa DHNs occurred in the callus cultures of buds, and the accumulation of Mr 72 and 27 kDa DHNs positively correlated with the lipid peroxidation activity. An increase in the content of DHNs was observed in cultures that differed in origin, growth indicators, and biochemical parameters, indicating the universality of this reaction. Thus, previously undescribed DHNs were identified, the accumulation of which is caused by water deficiency and is associated with manifestations of oxidative stress in the kidney cells of Scots pine. Full article

(This article belongs to the Section Plant Response to Abiotic Stress and Climate Change)

13 pages, 4507 KiB

Open AccessArticle

Chemotaxonomy of Southeast Asian Peperomia (Piperaceae) Using High-Performance Thin-Layer Chromatography Colour Scale Fingerprint Imaging and Gas Chromatography–Mass Spectrometry

by Yutthana Banchong, Theerachart Leepasert, Pakawat Jarupund, Trevor R. Hodkinson, Fabio Boylan and Chalermpol Suwanphakdee

Plants 2024, 13(19), 2751; https://doi.org/10.3390/plants13192751 - 30 Sep 2024

Viewed by 386

Abstract

The morphological characters of Southeast Asia’s indigenous Peperomia species are very similar, especially in their flower structures. The flowers are simple, hermaphrodite and lack a perianth. Therefore, many species are hard to distinguish using morphological characters alone. Here, we apply chemometric data for [...] Read more.

The morphological characters of Southeast Asia’s indigenous Peperomia species are very similar, especially in their flower structures. The flowers are simple, hermaphrodite and lack a perianth. Therefore, many species are hard to distinguish using morphological characters alone. Here, we apply chemometric data for species identification and classification, gathered using multiwavelength detection combined with the colour scale High-Performance Thin-Layer Chromatography (HPTLC) fingerprinting procedure and chemical compounds determined by Gas Chromatography–Mass Spectrometry (GC-MS). Fourteen taxa were investigated using hexane, ethyl acetate and ethanol solvent extractions. Principal component analysis (PCA) and hierarchical cluster analysis (HCA) were used with the colour scale fingerprints to classify the Peperomia species. The PCA and HCA using the chromatogram profile from hexane divided the taxa into six groups compared to the profile from ethyl acetate and ethanol, which each detected seven groups. The chromatogram from the combined dataset of all three solvents can differentiate all the species. The GC-MS data detected a total of 40 compounds from the hexane extract, and these differed among Peperomia species. This approach based on HPTLC fingerprinting and GC-MS analysis can therefore be used as a tool for authentication and identification studies of Peperomia species. Full article

(This article belongs to the Section Phytochemistry)

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17 pages, 935 KiB

Open AccessArticle

Endogenous γ-Aminobutyric Acid Accumulation Enhances Salinity Tolerance in Rice

by Mingjia Chen, Changhua Zhu, Hui Zhang, Siheng Chen, Xi Wang and Lijun Gan

Plants 2024, 13(19), 2750; https://doi.org/10.3390/plants13192750 - 30 Sep 2024

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Abstract

Rice is an important food crop worldwide but is usually susceptible to saline stress. When grown on soil with excessive salt, rice plants experience osmotic, ionic, and oxidative stresses that adversely affect growth performance. γ-Aminobutyric acid (GABA) is a nonproteinogenic amino acid that [...] Read more.

Rice is an important food crop worldwide but is usually susceptible to saline stress. When grown on soil with excessive salt, rice plants experience osmotic, ionic, and oxidative stresses that adversely affect growth performance. γ-Aminobutyric acid (GABA) is a nonproteinogenic amino acid that plays an important role in the metabolic activities of organisms. Glutamate decarboxylase (GAD) is the rate-limiting enzyme in GABA metabolism. Here, we genetically modified rice GAD by overexpression or CRISPR-mediated genome editing. These lines, named gad3-ox1 and gad3-ox2 or gad1/3-ko, were used to explore the effects of endogenous GABA accumulation on salt tolerance in rice. Both the gad3-ox1 and gad3-ox2 lines exhibited significant accumulation of the GABA content, whereas the gad1/3-ko line presented a reduced GABA content in vivo. Notably, the two overexpression lines were markedly resistant to salt stress compared with the wild-type and knockout lines. Furthermore, our results demonstrated that endogenous GABA accumulation in the gad3-ox1 and gad3-ox2 lines increased the contents of antioxidant substances and osmotic regulators, decreased the content of membrane lipid peroxidation products and the Na⁺ content, and resulted in strong tolerance to salt stress. Together, these data provide a theoretical basis for cultivating rice varieties with strong salt tolerance. Full article

(This article belongs to the Special Issue Plant Challenges in Response to Salt and Water Stress)

14 pages, 3803 KiB

Open AccessArticle

Identification of the BZR Family in Garlic (Allium sativum L.) and Verification of the AsBZR11 under Salt Stress

by Xianghan Peng, Jiaojiao Ruan, Fangling Jiang, Rong Zhou and Zhen Wu

Plants 2024, 13(19), 2749; https://doi.org/10.3390/plants13192749 - 30 Sep 2024

Viewed by 234

Abstract

Brassinazole-Resistant (BZR) is an important transcription factor (TF) in the brassinosteroid (BR) signaling pathway, which plays a crucial role in plant growth, development and stress resistance. In this study, we performed a genome-wide analysis of BZRs in garlic (Allium sativum L.) and [...] Read more.

Brassinazole-Resistant (BZR) is an important transcription factor (TF) in the brassinosteroid (BR) signaling pathway, which plays a crucial role in plant growth, development and stress resistance. In this study, we performed a genome-wide analysis of BZRs in garlic (Allium sativum L.) and identified a total of 11 members of the AsBZR gene family. By comparing the expression patterns of AsBZR genes under salt stress, the candidate gene AsBZR11 with salt tolerance function was identified. Subcellular localization results showed that AsBZR11 was localized in the nucleus. The salt tolerance of overexpression lines improved, and the germination rate and root length of overexpression lines increased as compared with wild type. The content of reactive oxygen species (ROS) decreased, and the activity of antioxidant enzymes increased in AsBZR11-OE, suggesting that AsBZR11 has the function of improving plant salt tolerance. Our results enriched the knowledge of plant BZR family and laid a foundation for the molecular mechanism of salt tolerance of garlic, which will provide a theoretical basis for the subsequent creation of salt-tolerant germplasm resources. Full article

(This article belongs to the Special Issue Genetic Basis and Physiological Responses of Horticultural Plants and Crops to Abiotic Stresses)

12 pages, 810 KiB

Open AccessArticle

Protective Effects of Wild Sulla coronaria (Fabaceae) Flowers Phytocomplex in Human Dermal Fibroblasts Stimulated with Interleukin-1β

by Giuseppe Antonio Malfa, Simone Bianchi, Vivienne Spadaro, Ekaterina Kozuharova, Pasquale Marino, Francesco Pappalardo, Claudia Di Giacomo and Rosaria Acquaviva

Plants 2024, 13(19), 2748; https://doi.org/10.3390/plants13192748 - 30 Sep 2024

Viewed by 211

Abstract

Sulla coronaria is indigenous to the Mediterranean region. It is grown as fodder in southern Italy because it contains various secondary metabolites with beneficial activities on animals. Recently, its potential use in cosmeceutical treatments for skin problems was reported. In this scenario, to [...] Read more.

Sulla coronaria is indigenous to the Mediterranean region. It is grown as fodder in southern Italy because it contains various secondary metabolites with beneficial activities on animals. Recently, its potential use in cosmeceutical treatments for skin problems was reported. In this scenario, to contribute to a possible cosmeceutical application, we characterized the phytochemical profile of Sulla coronaria flowers’ hydroalcoholic extract by HPLC-DAD, Folin-Ciocalteu, Aluminum Chloride methods, DPPH assay, and, for the first time, we evaluated the antioxidant and anti-inflammatory activities on dermal fibroblasts. The phytochemical analysis confirmed the significant content of phenolic compounds (TPC 69.8 ± 0.6 mg GAE/g extract, TFC 15.07 mg CE/g extract) and the remarkable presence of rutin, quercetin, and isorhamnetin derivatives that give to the phytocomplex a good antioxidant activity as highlighted by the DPPH assay (IC₅₀ of 8.04 ± 0.5 µg/mL). Through the reduction in NO• and ROS levels in human dermal fibroblasts, the biological tests demonstrated both the safety of the extract and its ability to counteract the inflammatory state generated by Interleukin-1β exposure. Our findings indicate that the antioxidant activities of the phytocomplex are strictly related to the anti-inflammatory action of the Sulla coronaria flowers extract, confirming that this plant could be a valuable source of bioactive molecules for cosmeceutical and nutraceutical applications. Full article

(This article belongs to the Special Issue Advanced Botanical Research in the Mediterranean Area: Studies in Honor of Prof. Francesco Maria Raimondo on the Occasion of His 80th Birthday)

36 pages, 18063 KiB

Open AccessArticle

Women’s Knowledge of Local Plants and Their Gastronomic Heritage in Chitral, NW Pakistan

by Arfaa Sabbah, Arshad Mehmood Abbasi, Muhammad Abdul Aziz, Fahdah Falah Benhasher, Andrea Pieroni, Ali Abdullah Aldosari, Mansour K. Gatasheh and Muhammad Amin

Plants 2024, 13(19), 2747; https://doi.org/10.3390/plants13192747 - 30 Sep 2024

Viewed by 257

Abstract

Women are the “guardians of the kitchen” and central to household food security, yet their role has never been studied across the Hindukush region or Pamiri Knot. This study explores the women’s knowledge (specifically from the Khowar (Kho) and Wakhi linguistic groups) of [...] Read more.

Women are the “guardians of the kitchen” and central to household food security, yet their role has never been studied across the Hindukush region or Pamiri Knot. This study explores the women’s knowledge (specifically from the Khowar (Kho) and Wakhi linguistic groups) of local food systems and determines their role in ensuring household food security and sustainability in the mountain regions of northern Pakistan. Based on in-depth semi-structured interviews with female informants in the Rech and Broghil valleys of upper Chitral, 91 different types of food products were recorded, including wild and cultivated species. Eremurus stenophyllus and Allium barsczewskii were the commonly utilized plant species, though distinct preferences between the Kho and Wakhi groups were noted. Prominent differences were perceived in using certain cultivated plants among the two ethnic groups. For instance, Kho preferred plants like Beta vulgaris, Zea mays, and Brassica napus as indicated by the use reports, while Wakhi concentrated on Thymus serpyllum, Zygophyllum obliquum and Papaver involucratum. Both groups had shared dairy practices, but cottage cheese and curd were highly cited among Kho, while double-fermented curd and Qurut for Wakhi. The study recorded some new food uses for specific plants, such as Atriplex hortensis, Carthamus tinctorius, Hylotelephium spp., and Saxifraga sibirica. Cross-culture analyses revealed a mosaic pattern of homogenous and heterogenous trends based on reported food species of plants/animals and their use reports. Our findings emphasize the significant role of women in sustaining local food diversity, food sustainability, and the preservation and security of the local food systems, cultural legacy, and household food management. Therefore, inclusive research addressing their social, economic, and environmental issues must be conducted. Furthermore, policies must incorporate women’s traditional knowledge to build resilient food systems. Full article

44 pages, 5144 KiB

Open AccessArticle

Investigation of Drought Stress on Chickpea (Cicer arietinum L.) Genotypes Employing Various Physiological Enzymatic and Non-Enzymatic Biochemical Parameters

by Ruchi Asati, Manoj Kumar Tripathi, Rakesh Kumar Yadav, Niraj Tripathi, Ravendra Singh Sikarwar and Prakash Narayan Tiwari

Plants 2024, 13(19), 2746; https://doi.org/10.3390/plants13192746 - 30 Sep 2024

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Abstract

Drought stress is a universal crisis in sustaining the growth and production of major legumes, including the chickpea. Drought severely reduces the biomass of chickpea plants, with the effect on leaves appearing the most apparent. The aim of this study was to investigate, [...] Read more.

Drought stress is a universal crisis in sustaining the growth and production of major legumes, including the chickpea. Drought severely reduces the biomass of chickpea plants, with the effect on leaves appearing the most apparent. The aim of this study was to investigate, using various physiological and biochemical markers throughout the pod filling stage, how 78 desi chickpea genotypes tolerated drought stress. Most of the evaluated characteristics showed significant variations between control and drought treatments. The mean performance of most of the investigated parameters significantly decreased under moisture-stressed conditions. RWC, SWD, MSI, and CTD were investigated under terminal drought-stressed conditions. Except for saturated water deficit (SWD), all remaining characteristics declined with increasing stress. Genotypes SAGL152210, SAGL152252, SAGL152347, SAGL22-115, and JG11 were recognized as drought-tolerant based on physiological characteristics. Biochemical markers viz., protein content, total soluble sugar, lipid peroxidation, and proline content, had an impact on osmotic adjustment. Based on non-enzymatic biochemical traits, genotypes SAGL22-115, ICC4958, ICCV201108, ICCV201107, SAGL152252, and JG11 were identified for their capability to survive under drought-stressed conditions. H₂O₂ content, CAT, SOD, POD, APX, and DPPH were considered antioxidant agents. Genotypes SAGL152208, SAGL22-105, SAGL22-112, ICC201108, SAGL152278, SAGL152252, SAGL162371, SAGL162390, ICC 4958, and JG315 may be considered drought-tolerant based on antioxidant activities. These genotypes are believed to be better equipped with physio-biochemical mechanisms and antioxidant defense systems at the cellular level and can be used in breeding programs to breed drought-tolerant cultivar(s). They can also be screened in the future, allowing the line(s) that have remained consistent over time to be recognized and registered as drought-tolerant donors. Full article

(This article belongs to the Special Issue Advances in Legume Crops Research)

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Open AccessArticle

Long-Term Study of the Effects of Environment, Variety, and Fertilisation on Yield and Stability of Spring Barley Grain

by Lukáš Hlisnikovský, Veronika Zemanová, Muhammad Roman, Ladislav Menšík and Eva Kunzová

Plants 2024, 13(19), 2745; https://doi.org/10.3390/plants13192745 - 30 Sep 2024

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Abstract

The stability and yield of barley grain are affected by several factors, such as climatic conditions, fertilisation, and the different barley varieties. In a long-term experiment in Prague, Czech Republic, established in 1955, we analysed the weather trends and how weather, fertilisation (10 [...] Read more.

The stability and yield of barley grain are affected by several factors, such as climatic conditions, fertilisation, and the different barley varieties. In a long-term experiment in Prague, Czech Republic, established in 1955, we analysed the weather trends and how weather, fertilisation (10 treatments in total), and different barley varieties affected grain yield and stability. A total of 44 seasons were evaluated. Trends in mean, minimum, and maximum temperatures from 1953 to 2023, as well as sunshine duration from 1961 to 2022, showed statistically significant increases. The trend for annual precipitation from 1953 to 2023 was not significant, but changes in precipitation were recorded via seasonal precipitation concentration indexes. The unfertilised Control and farmyard manure (FYM) provided the lowest mean yields. Mineral fertilisers (NPK) and FYM+NPK increased grain yield, ranging from 4.9 t ha⁻¹ to 5.5 t ha⁻¹. Three notable correlations between weather conditions and yields were observed: (1) June precipitation (r = 0.4), (2) minimal temperature in July (r = 0.3), and (3) sunshine duration in May (r = −0.5). According to the linear–plateau response model, the reasonable N dose is 55 kg ha⁻¹, resulting in a mean yield of 6.7 t ha⁻¹ for the contemporarily used barley variety Sebastián. Full article

(This article belongs to the Special Issue Climate Change and Weather Extremes’ Impacts on Crops)

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Plants, Volume 13, Issue 19 (October-1 2024) – 105 articles

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