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14 pages, 5194 KiB  
Communication
A Holistic Irrigation Advisory Policy Scheme by the Hellenic Agricultural Organization: An Example of a Successful Implementation in Crete, Greece
by Nektarios N. Kourgialas
Water 2024, 16(19), 2769; https://doi.org/10.3390/w16192769 (registering DOI) - 28 Sep 2024
Abstract
The aim of this communication article is to present a successful irrigation advisory scheme on the island of Crete (Greece) provided by the Hellenic Agricultural Organization (ELGO DIMITRA), which is well adapted to the different needs of farmers and water management agencies. The [...] Read more.
The aim of this communication article is to present a successful irrigation advisory scheme on the island of Crete (Greece) provided by the Hellenic Agricultural Organization (ELGO DIMITRA), which is well adapted to the different needs of farmers and water management agencies. The motivation to create this advisory scheme stems from the need to save water resources while ensuring optimal production in a region like Crete where droughts seem to occur more and more frequently in recent years. This scheme/approach has three different levels of implementation (components) depending on the spatial level and end-users’ needs. The first level concerns the weekly irrigation bulletins in the main agricultural areas of the island with the aim of informing farmers and local water managers about crop irrigation needs. The second level concerns an innovative digital web-based platform for the precise determination of the irrigation needs of Crete’s crops at a parcel level as well as optimal adaptation strategies in the context of climate change. In this platform, important features such as real-time meteorological information, spatial data on the cultivation type of parcels, validated algorithms for calculating crop irrigation needs, an accurate soil texture map derived from satellite images, and appropriate agronomic practices to conserve water based on cultivation and the geomorphology of a farm are considered. The third level of the proposed management approach includes an open-source Internet of Things (IoT) intelligent irrigation system for optimal individual parcel irrigation scheduling. This IoT system includes soil moisture and atmospheric sensors installed on the field, as well as the corresponding laboratory soil hydraulic characterization service. This third-level advisory approach provides farmers with specialized information on the automated irrigation system and optimization of irrigation water use. All the above irrigation advisory approaches have been implemented and evaluated by end-users with a very high degree of satisfaction in terms of effectiveness and usability. Full article
13 pages, 1651 KiB  
Article
Effect of Different Basal Media and Organic Supplements on In Vitro Seedling Development of the Endangered Orchid Species Dendrobium moniliforme (L.) Swartz
by Jung Eun Hwang, Hyeong Bin Park, Dae Young Jeon, Hwan Joon Park, Seongjun Kim, Chang Woo Lee, Young-Joong Kim and Young-Jun Yoon
Plants 2024, 13(19), 2721; https://doi.org/10.3390/plants13192721 (registering DOI) - 28 Sep 2024
Abstract
The orchid Dendrobium moniliforme faces endangerment due to habitat loss and illegal harvesting, necessitating the development of an optimized artificial propagation system to aid conservation and reintroduction efforts. This study evaluated the effects of three plant growth media, namely Murashige and Skoog (MS), [...] Read more.
The orchid Dendrobium moniliforme faces endangerment due to habitat loss and illegal harvesting, necessitating the development of an optimized artificial propagation system to aid conservation and reintroduction efforts. This study evaluated the effects of three plant growth media, namely Murashige and Skoog (MS), Hyponex, and Orchid Maintenance Medium (OMM) (P668), and various organic additives (apple homogenate, banana homogenate, and coconut water) on the in vitro seedling growth of D. moniliforme. The results reveal that, in early postgermination stages, seedlings achieve maximum growth in the Hyponex medium, with a fresh weight (92 mg) and root length (2.7 cm) approximately 20-fold greater than those in the MS medium and OMM. After 6 months, for seedlings grown in MS medium and OMM with banana (50 g·L−1), the mean fresh weights were 29 and 107 mg, respectively; however, the highest biomass was observed in seedlings grown in the Hyponex medium with coconut water (50 mL·L−1), exhibiting a mean fresh weight of 201 mg. This study highlights Hyponex medium with coconut water as the most effective combination for promoting D. moniliforme growth and identifies suitable organic supplements for the in vitro cultivation of seedlings from asymbiotic seed culture. This propagation system offers valuable technical support for the mass production and conservation of this epiphytic orchid. Full article
(This article belongs to the Section Plant Physiology and Metabolism)
16 pages, 6222 KiB  
Article
Leveraging Digital Technologies for Carbon Footprint Tracking in Perennial Cultivations: A Case Study of Walnut Orchard Establishment in Central Greece
by Maria Lampridi, Dimitrios Kateris, Charalampos Myresiotis, Remigio Berruto, Vassilios Fragos, Thomas Kotsopoulos and Dionysis Bochtis
Agronomy 2024, 14(10), 2241; https://doi.org/10.3390/agronomy14102241 (registering DOI) - 28 Sep 2024
Abstract
The present paper aims to quantify the carbon emissions associated with the establishment of 15 walnut orchards (“Juglans californica”) in the greater area of Magnisia, Greece, with the use of a carbon footprint tool interconnected to a Farm Management Information System. [...] Read more.
The present paper aims to quantify the carbon emissions associated with the establishment of 15 walnut orchards (“Juglans californica”) in the greater area of Magnisia, Greece, with the use of a carbon footprint tool interconnected to a Farm Management Information System. The data collection spanned the first five years following the planting of the trees, providing a comprehensive view of the emissions during this critical establishment phase. Over the five-year period examined (02/2019–12/2023), the results revealed net carbon emissions amounting to 13.71 tn CO2 eq ha−1, with the calculated emissions showing an increasing trend from the first year through the fifth year. Scope 1 (7.38 tn CO2 eq ha−1) and Scope 2 (3.71 tn CO2 eq ha−1) emissions emerged as the most significant, while irrigation (drip irrigation) and fertilizing practices were identified as the highest contributors to emissions. This study highlights the significance of using integrated digital tools for monitoring the performance of cultivations rather than standalone tools that are currently widely available. Integrated tools that incorporate various applications simplify data collection, encourage accurate record-keeping, and facilitate certification processes. By automating data entry and calculations, these tools reduce human error during agricultural carbon management and save time; thus, the integration of digital monitoring tools is vital in improving data accuracy, streamlining certification processes, and promoting eco-friendly practices, crucial for the evolving carbon market. Full article
16 pages, 3700 KiB  
Article
Gene Expression Divergence in Eugenia uniflora Highlights Adaptation Across Contrasting Atlantic Forest Ecosystems
by Andreia C. Turchetto-Zolet, Fabiano Salgueiro, Frank Guzman, Nicole M. Vetö, Nureyev F. Rodrigues, Natalia Balbinott, Marcia Margis-Pinheiro and Rogerio Margis
Plants 2024, 13(19), 2719; https://doi.org/10.3390/plants13192719 (registering DOI) - 28 Sep 2024
Abstract
Understanding the evolution and the effect of plasticity in plant responses to environmental changes is crucial to combat global climate change. It is particularly interesting in species that survive in distinct environments, such as Eugenia uniflora, which thrives in contrasting ecosystems within the [...] Read more.
Understanding the evolution and the effect of plasticity in plant responses to environmental changes is crucial to combat global climate change. It is particularly interesting in species that survive in distinct environments, such as Eugenia uniflora, which thrives in contrasting ecosystems within the Atlantic Forest (AF). In this study, we combined transcriptome analyses of plants growing in nature (Restinga and Riparian Forest) with greenhouse experiments to unveil the DEGs within and among adaptively divergent populations of E. uniflora. We compared global gene expression among plants from two distinct ecological niches. We found many differentially expressed genes between the two populations in natural and greenhouse-cultivated environments. The changes in how genes are expressed may be related to the species’ ability to adapt to specific environmental conditions. The main difference in gene expression was observed when plants from Restinga were compared with their offspring cultivated in greenhouses, suggesting that there are distinct selection pressures underlying the local environmental and ecological factors of each Restinga and Riparian Forest ecosystem. Many of these genes engage in the stress response, such as water and nutrient transport, temperature, light intensity, and gene regulation. The stress-responsive genes we found are potential genes for selection in these populations. These findings revealed the adaptive potential of E. uniflora and contributed to our understanding of the role of gene expression reprogramming in plant evolution and niche adaptation. Full article
(This article belongs to the Special Issue Abiotic Stress Responses in Plants)
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29 pages, 9863 KiB  
Article
Enhancing Coffee Agroforestry Systems Suitability Using Geospatial Analysis and Sentinel Satellite Data in Gedeo Zone, Ethiopia
by Wondifraw Nigussie, Husam Al-Najjar, Wanchang Zhang, Eshetu Yirsaw, Worku Nega, Zhijie Zhang and Bahareh Kalantar
Sensors 2024, 24(19), 6287; https://doi.org/10.3390/s24196287 (registering DOI) - 28 Sep 2024
Abstract
The Gedeo zone agroforestry systems are the main source of Ethiopia’s coffee beans. However, land-use and suitability analyses are not well documented due to complex topography, heterogeneous agroforestry, and lack of information. This research aimed to map the coffee coverage and identify land [...] Read more.
The Gedeo zone agroforestry systems are the main source of Ethiopia’s coffee beans. However, land-use and suitability analyses are not well documented due to complex topography, heterogeneous agroforestry, and lack of information. This research aimed to map the coffee coverage and identify land suitability for coffee plantations using remote sensing, Geographic Information Systems (GIS), and the Analytical Hierarchy Process (AHP) in the Gedeo zone, Southern Ethiopia. Remote sensing classifiers often confuse agroforestry and plantations like coffee cover with forest cover because of their similar spectral signatures. Mapping shaded coffee in Gedeo agroforestry using optical or multispectral remote sensing is challenging. To address this, the study identified and mapped coffee coverage from Sentinel-1 data with a decibel (dB) value matched to actual coffee coverage. The actual field data were overlaid on Sentinel-1, which was used to extract the raster value. Pre-processing, classification, standardization, and reclassification of thematic layers were performed to find potential areas for coffee plantation. Hierarchy levels of the main criteria were formed based on climatological, edaphological, physiographic, and socioeconomic factors. These criteria were divided into 14 sub-criteria, reclassified based on their impact on coffee growing, with their relative weights derived using AHP. From the total study area of 1356.2 km2, the mapped coffee coverage is 583 km2. The outcome of the final computed factor weight indicated that average annual temperature and mean annual rainfall are the primary factors, followed by annual mean maximum temperature, elevation, annual mean minimum temperature, soil pH, Land Use/Land Cover (LULC), soil texture, Cation Exchange Capacity (CEC), slope, Soil Organic Matter (SOM), aspect, distance to roads, and distance to water, respectively. The identified coffee plantation potential land suitability reveals unsuitable (413 km2), sub-suitable (596.1 km2), and suitable (347.1 km2) areas. This study provides comprehensive spatial details for Ethiopian cultivators, government officials, and agricultural extension specialists to select optimal coffee farming locations, enhancing food security and economic prosperity. Full article
(This article belongs to the Special Issue Remote Sensing Technology for Agricultural and Land Management)
15 pages, 2060 KiB  
Article
Morphological and Phylogenetic Analyses Reveal Dictyostelids (Cellular Slime Molds) Colonizing the Ascocarp of Morchella
by Wen-Shu Hu, Lin-Lin Jiang, Pu Liu, Xiao-Yan Zhang, Wei Wei and Xi-Hui Du
J. Fungi 2024, 10(10), 678; https://doi.org/10.3390/jof10100678 (registering DOI) - 28 Sep 2024
Abstract
Morchella spp. (true morels) are precious edible mushrooms consumed around the world, with a delicious taste, rich nutritional value, and unique healthcare effects. Various fungi and bacteria have been reported to colonize the ascocarps of Morchella, damaging their fruiting bodies and leading [...] Read more.
Morchella spp. (true morels) are precious edible mushrooms consumed around the world, with a delicious taste, rich nutritional value, and unique healthcare effects. Various fungi and bacteria have been reported to colonize the ascocarps of Morchella, damaging their fruiting bodies and leading to serious economic losses in cultivation. The species identification of these colonizing organisms is crucial for understanding their colonization mechanisms on morels. Slime molds, which have characteristics of both “fungi” and “animals”, can occasionally colonize crops and edible fungi. However, there have been no reports of dictyostelid cellular slime molds (dictyostelids) colonizing plants and fungi to date. In this study, we discovered that dictyostelids colonized the surface of one wild ascoma of Morchella in the forest of Chongqing, China, with the tissues being black and rotten. Macro- and micro-morphological observations, along with molecular phylogenetic analyses, identified the specimens investigated in this study as Dictyostelium implicatum and Morchella sp. Mel-21. The results provide new knowledge of dictyostelid colonization on organisms and contribute to the diversity of species colonizing true morels. Moreover, this is also the first report of dictyostelids distributed in Chongqing, China. This study enhances our insights into the life history and potential ecological significance of dictyostelids and updates their distribution area in China. Further research will be conducted to uncover the mechanisms behind the colonization observed in this study. Full article
(This article belongs to the Special Issue Diversity, Phylogeny and Ecology of Forest Fungi)
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17 pages, 3309 KiB  
Article
Exploring the Synergistic Secretome: Insights from Co-Cultivation of Aspergillus brasiliensis and Trichoderma reesei RUT-C30
by Guilherme Bento Sperandio, Reynaldo Magalhães Melo, Taísa Godoy Gomes, Robert Neil Gerard Miller, Luis Henrique Ferreira do Vale, Marcelo Valle de Sousa, Carlos André Ornelas Ricart and Edivaldo Ximenes Ferreira Filho
J. Fungi 2024, 10(10), 677; https://doi.org/10.3390/jof10100677 (registering DOI) - 28 Sep 2024
Viewed by 6
Abstract
The spectrum of enzymes required for complete lignocellulosic waste hydrolysis is too diverse to be secreted by a single organism. An alternative is to employ fungal co-cultures to obtain more diverse and complete enzymatic cocktails without the need to mix enzymes during downstream [...] Read more.
The spectrum of enzymes required for complete lignocellulosic waste hydrolysis is too diverse to be secreted by a single organism. An alternative is to employ fungal co-cultures to obtain more diverse and complete enzymatic cocktails without the need to mix enzymes during downstream processing. This study evaluated the co-cultivation of Aspergillus brasiliensis and Trichoderma reesei RUT-C30 in different conditions using sugarcane bagasse as the carbon source. The resulting enzymatic cocktails were characterized according to the impact of strain inoculation time on enzymatic activities and proteome composition. Data revealed that the profile of each enzymatic extract was highly dependent on the order in which the participating fungi were inoculated. Some of the co-cultures exhibited higher enzyme activities compared to their respective monocultures for enzymes such as CMCase, pectinase, β-glucosidase, and β-xylosidase. Analysis of the T. reesei RUT-C30 and A. brasiliensis co-culture secretome resulted in the identification of 167 proteins, with 78 from T. reesei and 89 from A. brasiliensis. In agreement with the enzymatic results, proteome analysis also revealed that the timing of inoculation greatly influences the overall secretome, with a predominance of T. reesei RUT-C30 proteins when first inoculated or in simultaneous inoculation. Full article
(This article belongs to the Special Issue Fungal-Related Proteomics in Biotechnology and Health)
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11 pages, 574 KiB  
Article
Why Do Farmers Disadopt Successful Innovations? Socio-Ecological Niches and Rice Intensification
by Marcus Taylor and Suhas Bhasme
Agronomy 2024, 14(10), 2238; https://doi.org/10.3390/agronomy14102238 (registering DOI) - 28 Sep 2024
Viewed by 55
Abstract
The adoption of innovations in rice cultivation is presumed to operate in a rational manner, wherein new technologies or practices that successfully increase productivity or resource efficiency are adopted by target farmers based on cost-benefit calculations. In contrast, this paper examines a case [...] Read more.
The adoption of innovations in rice cultivation is presumed to operate in a rational manner, wherein new technologies or practices that successfully increase productivity or resource efficiency are adopted by target farmers based on cost-benefit calculations. In contrast, this paper examines a case of a public initiative to promote the system of rice intensification (SRI), wherein farmers widely disadopted the technique despite reporting increasing yields and reduced water consumption. To explain this paradox, we use the concept of the socio-ecological niche to examine a range of social and institutional factors that shape farmers’ decision-making. These included (1) access to land and labour; (2) water management capacity; (3) the quality of networks for knowledge sharing. The research suggests that small variations in these categories among otherwise similar smallholder households can markedly shape farmers’ risk perceptions and tangible outcomes with SRI. The implication is that agricultural innovations should be judged within their wider social context rather than on narrow evaluations of agronomic efficiency. Importantly, this must involve greater feedback mechanisms from smallholders with a variety of socio-economic profiles to help shape the character of agricultural innovations and extension strategies. Full article
(This article belongs to the Section Innovative Cropping Systems)
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16 pages, 3527 KiB  
Review
An Update on the Waste Management of the Amazonian Açaí Berry for the Civil Engineering Sector
by Guillaume Polidori, Sébastien Murer, Fabien Beaumont, Mohammed Lachi, Christophe Bliard, Ouahcène Nait-Rabah, Lina Bufalino and Fabien Bogard
Sustainability 2024, 16(19), 8451; https://doi.org/10.3390/su16198451 (registering DOI) - 28 Sep 2024
Viewed by 96
Abstract
The rising demand for açaí berries in Amazonian Brazil and French Guiana generates a significant amount of waste, namely the fruit’s stone, which accounts for 80% of the dry fruit’s mass. Recently, various studies have explored the potential valorization of açaí waste in [...] Read more.
The rising demand for açaí berries in Amazonian Brazil and French Guiana generates a significant amount of waste, namely the fruit’s stone, which accounts for 80% of the dry fruit’s mass. Recently, various studies have explored the potential valorization of açaí waste in the civil engineering sector, including the functionalization of the fibers surrounding the stone and the multiphysics testing of composite materials based on açaí fibers and/or stones, treated or untreated. This literature review aims to provide an overview of the technology readiness levels (TRLs) of the existing techniques capable of reducing the environmental impact of both the cultivation and management of naturally occurring açaí. While the research to date is promising, it remains at the prototype stage, and the mass ratio of waste in composites, regardless of their type, limits addressing the underlying ecological problem of açaí waste processing. Further experimental investigations are required to improve the functionalization processes, enabling the use of higher proportions of fibers and/or stones in cementitious composites and their large-scale production. Full article
(This article belongs to the Section Sustainable Materials)
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17 pages, 3247 KiB  
Article
Quercus glauca Acorn Seed Coat Extract Promotes Wound Re-Epithelialization by Facilitating Fibroblast Migration and Inhibiting Dermal Inflammation
by Shin-Hye Kim, Hye-Lim Shin, Tae Hyun Son, So-An Lim, Dongsoo Kim, Jun-Hyuck Yoon, Hyunmo Choi, Hwan-Gyu Kim and Sik-Won Choi
Biology 2024, 13(10), 775; https://doi.org/10.3390/biology13100775 (registering DOI) - 28 Sep 2024
Viewed by 112
Abstract
The skin, recognized as the largest organ in the human body, serves a vital function in safeguarding against external threats. Severe damage to the skin can pose significant risks to human health. There is an urgent requirement for safe and effective therapies for [...] Read more.
The skin, recognized as the largest organ in the human body, serves a vital function in safeguarding against external threats. Severe damage to the skin can pose significant risks to human health. There is an urgent requirement for safe and effective therapies for wound healing. While phytotherapy has been widely utilized for various health conditions, the potential of Quercus glauca in promoting wound healing has not been thoroughly explored. Q. glauca is a cultivated crop known for its abundance of bioactive compounds. This study examined the wound-healing properties of Quercus glauca acorn seed coat water extract (QGASE). The findings from the study suggest that QGASE promotes wound closure in HF cells by upregulating essential markers related to the wound-healing process. Additionally, QGASE demonstrates antioxidant effects, mitigating oxidative stress and aiding in recovery from injuries induced by H2O2. In vivo experiments provide additional substantiation supporting the efficacy of QGASE in enhancing wound healing. The collective results indicate that QGASE may be a promising candidate for the development of innovative therapeutic strategies aimed at enhancing skin wound repair. Full article
(This article belongs to the Special Issue Plant Natural Products: Mechanisms of Action for Promoting Health)
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22 pages, 9930 KiB  
Article
Effect of Fine-Pore Aeration Tube Layout on Dissolved Oxygen Distribution and Aeration Performance in Large-Scale Pond
by Mohammad Tauviqirrahman, Ghinna Nur Akram and M. Muchammad
Water 2024, 16(19), 2763; https://doi.org/10.3390/w16192763 (registering DOI) - 28 Sep 2024
Viewed by 165
Abstract
Dissolved oxygen (DO) is a crucial water quality characteristic in the cultivation of vannamei shrimp. Increasing the DO concentration in shrimp ponds can be carried out using the aeration method with a tool called an aerator. In this study, types of fine-pore aeration [...] Read more.
Dissolved oxygen (DO) is a crucial water quality characteristic in the cultivation of vannamei shrimp. Increasing the DO concentration in shrimp ponds can be carried out using the aeration method with a tool called an aerator. In this study, types of fine-pore aeration tubes are chosen. This aerator offers multiple benefits, such as superior aeration efficiency, effortless installation, and minimal clogging. In practice, fine-pore aeration tubes can be arranged according to needs, so the layout used can influence the resulting aeration performance. This research uses the computational fluid dynamics (CFD) method to analyze DO distribution, water circulation, and aeration performance (KLa20, SOTR, and SOTE) produced in various aerator layouts, namely straight-type, ring-type, and square-type, in a vannamei shrimp pond. The results show that the straight-type layout has the best DO distribution because it is spread throughout the pond area. The square-type layout has the best water circulation because it has the largest area with water velocities of less than 5 cm/s. The optimal aeration performance was achieved with the straight-type layout, which demonstrated a KLa20 value of 3.16 h−1, SOTR value of 19.20 kg/h, and SOTE of 29.30%. Full article
(This article belongs to the Section Water, Agriculture and Aquaculture)
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14 pages, 2058 KiB  
Article
Sustainable Exploitation of Wine Lees as Yeast Extract Supplement for Application in Food Industry and Its Effect on the Growth and Fermentative Ability of Lactiplantibacillus plantarum and Saccharomyces cerevisiae
by Evangelos Kokkinomagoulos and Panagiotis Kandylis
Sustainability 2024, 16(19), 8449; https://doi.org/10.3390/su16198449 (registering DOI) - 28 Sep 2024
Viewed by 186
Abstract
Wine lees, the residue left behind after racking or bottling of wine, are predominantly composed of dead yeast cells, ethanol, phenolic compounds, and tartrates. Yeast extract (i.e., commercial yeast extract), a highly nutritious powder derived from commercially cultivated yeast biomass, is commonly used [...] Read more.
Wine lees, the residue left behind after racking or bottling of wine, are predominantly composed of dead yeast cells, ethanol, phenolic compounds, and tartrates. Yeast extract (i.e., commercial yeast extract), a highly nutritious powder derived from commercially cultivated yeast biomass, is commonly used in nutrient media as a nitrogen source. In the context of by-product valorization, wine lees could potentially be used to produce a substitute for commercial yeast extract (CYE). In our study we investigated the growth and fermentative ability of two major winemaking microorganisms, Lactiplantibacillus plantarum and Saccharomyces cerevisiae, in culture media containing a wine lees yeast extract (WLYE) and a CYE. The effects of yeast extract type, concentration, and initial cell concentration (y0) on key kinetic parameters—maximum specific growth rate (μmax), lag phase duration (λ), and maximum cell concentration (ymax)—were evaluated. For L. plantarum, the results showed that using a WLYE led to similar kinetic parameters to those obtained with a CYE, with λ being unaffected by y0 in samples containing a WLYE. For S. cerevisiae, simultaneous addition of both yeast extracts led to increased μmax values (up to 0.136 h−1) compared to individually added yeast extracts, although this negatively affected λ and ymax. Current research on wine lees is mainly focused on using them as a substrate to produce valuable metabolites through fermentation, overlooking the potential industrial applications of the nutrient-rich autolysate. The findings of this study appear promising for the holistic valorization of wine lees, contributing towards the concepts of sustainability and circular economy. Full article
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16 pages, 4052 KiB  
Article
Effects of Alkalinity Stress on Amino Acid Metabolism Profiles and Oxidative-Stress-Mediated Apoptosis/Ferroptosis in Hybrid Sturgeon (Huso dauricus ♀ × Acipenser schrenckii ♂) Livers
by Cunhua Zhai, Xiafei Liu, Yutao Li, Ruoyu Wang, Weihua Lv, Bo Ma, Dingchen Cao and Ying Zhang
Int. J. Mol. Sci. 2024, 25(19), 10456; https://doi.org/10.3390/ijms251910456 (registering DOI) - 27 Sep 2024
Viewed by 396
Abstract
Alkaline water is toxic to cultured aquatic animals that frequently live in pH-neutral freshwater. Overfishing and habitat destruction have contributed to the decline in the wild sturgeon population; consequently, the domestic hybrid sturgeon has become an increasingly important commercial species in China. Hybrid [...] Read more.
Alkaline water is toxic to cultured aquatic animals that frequently live in pH-neutral freshwater. Overfishing and habitat destruction have contributed to the decline in the wild sturgeon population; consequently, the domestic hybrid sturgeon has become an increasingly important commercial species in China. Hybrid sturgeons are widely cultured in alkaline water, but little is known about the effects of alkalinity stress on hybrid sturgeon liver tissues. We exposed hybrid sturgeons to four alkaline concentrations (3.14 ± 0.02 mmol/L, 7.57 ± 0.08 mmol/L, 11.78 ± 0.24 mmol/L and 15.46 ± 0.48 mmol/L). Histopathology, biochemical index assessment, gene expression level detection and metabolomics analysis were used to investigate the negative effects on liver functions following exposure to NaHCO3. Livers exposed to alkaline stress exhibited severe tissue injury and clear apoptotic characteristics. With increased exposure concentrations, the hepatic superoxide dismutase, catalase, glutathione peroxidase and alkaline phosphatase activities significantly decreased in a dose-dependent manner. NaHCO3 exposure up-regulated the transcriptional levels of apoptosis/ferroptosis-related genes in livers. Similarly, the expression trends of interleukin-1β and heat shock protein genes also increased in high-alkalinity environments. However, the expression levels of complement protein 3 significantly decreased (p < 0.05). Hepatic untargeted metabolomics revealed the alteration conditions of various metabolites associated with the antioxidant response, the ferroptosis process and amino acid metabolism (such as beta-alanine metabolism; alanine, aspartate and glutamate metabolism; and glycine, serine and threonine metabolism). These data provided evidence that NaHCO3 impaired immune functions and the integrity of hybrid sturgeon liver tissues by mediating oxidative-stress-mediated apoptosis and ferroptosis. Our results shed light on the breeding welfare of domestic hybrid sturgeons and promote the economic development of fisheries in China. Full article
(This article belongs to the Section Biochemistry)
16 pages, 1014 KiB  
Article
Characterizing the Contribution of Strain Specificity to the Microbiota Structure and Metabolites of Muqu and Fresh High-Temperature Daqu
by Yi Zhang, Zhu Zhang, Jun Huang, Rongqing Zhou, Qiuxiang Tang and Yao Jin
Foods 2024, 13(19), 3098; https://doi.org/10.3390/foods13193098 (registering DOI) - 27 Sep 2024
Viewed by 309
Abstract
In this study, the differences in physicochemical properties, microbial community structure, and metabolic characteristics between various fortified Muqu and their corresponding high-temperature Daqu (HTD) were investigated using multiphase detection methods. The results demonstrated that the physicochemical properties, community structure, dominant bacterial composition, and [...] Read more.
In this study, the differences in physicochemical properties, microbial community structure, and metabolic characteristics between various fortified Muqu and their corresponding high-temperature Daqu (HTD) were investigated using multiphase detection methods. The results demonstrated that the physicochemical properties, community structure, dominant bacterial composition, and metabolic components varied significantly among the different types of fortified HTD. The differences between HTDs became more pronounced when fortified HTD was used as Muqu. Compared to HTD, Muqu exhibited a more complex volatile profile, while HTD contained higher levels of characteristic non-volatile components. The cultivable bacteria count in Muqu was significantly higher than that in HTD, while the cultivable fungi count was slightly lower than that in HTD. The fungal profiles in HTD were primarily associated with starch hydrolysis and ethanol synthesis, while bacterial activity was more prominent in Muqu. Additionally, pyrazine synthesis was mainly attributed to fungi in Muqu and bacteria in HTD. Source Tracker analysis indicated that 8.11% of the bacteria and 26.76% of the fungi originated from Muqu. This study provides a theoretical foundation for the controlled production of HTD, contributing to improvements in its quality and consistency. Full article
(This article belongs to the Special Issue Food Quality Control: Microbial Diversity and Metabolic Regulation)
13 pages, 3375 KiB  
Communication
The Situation of Counterfeited and Mislabeled Commercialized Edible Mushrooms in China and the Development of Possible Controls
by Jinlin Liu, Jingyi Sun, Ruyan He, Jing Xia and Peimin He
Foods 2024, 13(19), 3097; https://doi.org/10.3390/foods13193097 (registering DOI) - 27 Sep 2024
Viewed by 273
Abstract
Edible mushroom products, encompassing both cultivated and wild varieties, are highly favored by consumers due to their rich nutritional profiles, including significant levels of proteins and amino acids. These mushrooms have extensive applications across the food, pharmaceutical, and cosmetic industries, making the edible [...] Read more.
Edible mushroom products, encompassing both cultivated and wild varieties, are highly favored by consumers due to their rich nutritional profiles, including significant levels of proteins and amino acids. These mushrooms have extensive applications across the food, pharmaceutical, and cosmetic industries, making the edible mushroom industry a vital component of global poverty alleviation efforts. Taking China as an example, the country produces over 45 million tons of edible mushrooms annually, accounting for 94.01% of the world’s total production, thereby establishing itself as the leading global producer of edible mushrooms. However, alongside the rapid expansion of this industry, concerns have emerged regarding counterfeit products and incidents of poisoning resulting from the consumption of toxic wild mushrooms. As follows, to advance the development and integrity of the mushroom production and processing industry: (1) This study presents the situation of counterfeit edible mushrooms and elucidates the factors contributing to the production of fraudulent products from both subjective and non-subjective perspectives. (2) We provide a detailed introduction to 22 varieties of freshly cultivated edible mushrooms and commonly encountered wild edible mushrooms in the Chinese consumer market, proposing the application of DNA barcoding, environmental DNA analysis, and other technologies for the future authentication of counterfeit mushroom products. (3) Concurrently, we present an overview of mushroom poisoning incidents in China from 2010 to 2023, emphasizing the challenges in mitigating the risks associated with wild mushroom consumption and preventing food poisoning, thereby necessitating heightened consumer caution. (4) Finally, we offer four recommendations aimed at ensuring the healthy, stable, and sustainable growth of the edible mushroom industry. Full article
(This article belongs to the Special Issue Mushroom Biotechnology in Food Industry: 2nd Edition)
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