The following article is Free article

Finite size corrections to random Boolean networks

, , and

Published 18 December 2006 IOP Publishing Ltd
, , Citation Michele Leone et al J. Stat. Mech. (2006) P12012 DOI 10.1088/1742-5468/2006/12/P12012

1742-5468/2006/12/P12012

Abstract

Since their introduction, Boolean networks have been traditionally studied in view of their rich dynamical behaviour under different update protocols and for their qualitative analogy with cell regulatory networks. More recently, tools borrowed from the statistical physics of disordered systems and from computer science have provided a more complete characterization of their equilibrium behaviour. However, the largest number of results have been obtained in the thermodynamic limit, which is often far from being reached when dealing with realistic instances of the problem. The numerical analysis presented here aims at comparing—for a specific family of models—the outcomes given by the heuristic belief propagation algorithm with those given by exhaustive enumeration. In the second part of the paper some analytical considerations on the validity of the annealed approximation are discussed.

Export citation and abstract BibTeX RIS

Please wait… references are loading.
10.1088/1742-5468/2006/12/P12012