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Cobalt chelatase

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cobalt chelatase
Putative cobalt chelatase monomer from Desulvobrio vulgaris.[1]
Identifiers
EC no.6.6.1.2
CAS no.81295-49-0
Databases
IntEnzIntEnz view
BRENDABRENDA entry
ExPASyNiceZyme view
KEGGKEGG entry
MetaCycmetabolic pathway
PRIAMprofile
PDB structuresRCSB PDB PDBe PDBsum
Gene OntologyAmiGO / QuickGO
Search
PMCarticles
PubMedarticles
NCBIproteins
Cobalt chelatase, CobT subunit
Identifiers
SymbolCobT
PfamPF06213
InterProIPR006538
Available protein structures:
Pfam  structures / ECOD  
PDBRCSB PDB; PDBe; PDBj
PDBsumstructure summary

Cobalt chelatase (EC 6.6.1.2) is an enzyme that catalyzes the chemical reaction

ATP + hydrogenobyrinic acid a,c-diamide + Co2+ + H2O ADP + phosphate + cob(II)yrinic acid a,c-diamide + H+

The four substrates of this enzyme are ATP, hydrogenobyrinic acid a,c-diamide, Co2+, and H2O; its four products are ADP, phosphate, cob(II)yrinic acid a,c-diamide, and H+.

The aerobic cobalt chelatase (aerobic cobalamin biosynthesis pathway)[2][3] consists of three subunits, CobT, CobN (InterProIPR003672) and CobS (InterProIPR006537).

The macrocycle of vitamin B12 can be complexed with metal via the ATP-dependent reactions in the aerobic pathway (e.g., in Pseudomonas denitrificans) or via ATP-independent reactions of sirohydrochlorin in the anaerobic pathway (e.g., in Salmonella typhimurium).[4][5] The corresponding cobalt chelatases are not homologous. However, aerobic cobalt chelatase subunits CobN and CobS are homologous to Mg-chelatase subunits BchH and BchI, respectively.[5] CobT, too, has been found to be remotely related to the third subunit of Mg-chelatase, BchD (involved in bacteriochlorophyll synthesis, e.g., in Rhodobacter capsulatus).[5]

This enzyme belongs to the family of ligases, specifically those forming nitrogen-D-metal bonds in coordination complexes. The systematic name of this enzyme class is hydrogenobyrinic-acid-a,c-diamide:cobalt cobalt-ligase (ADP-forming). Other names in common use include hydrogenobyrinic acid a,c-diamide cobaltochelatase, CobNST, and CobNCobST. This enzyme is part of the biosynthetic pathway to cobalamin (vitamin B12) in aerobic bacteria.

See also

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References

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  1. ^ Romão, Célia V.; Ladakis, Dimitrios; Lobo, Susana A. L.; Carrondo, Maria A.; Brindley, Amanda A.; Deery, Evelyne; Matias, Pedro M.; Pickersgill, Richard W.; Saraiva, Lígia M.; Warren, Martin J. (4 January 2011). "Evolution in a family of chelatases facilitated by the introduction of active site asymmetry and protein oligomerization". Proceedings of the National Academy of Sciences. 108 (1): 97–102. doi:10.1073/pnas.1014298108. PMC 3017170. PMID 21173279.
  2. ^ Crouzet J, Cameron B, Cauchois L, Rigault S, Blanche F, Guilhot C, Levy-schil S, Rouyez MC (1991). "Genetic and sequence analyses of a Pseudomonas denitrificans DNA fragment containing two cob genes". J. Bacteriol. 173 (19): 6058–6065. doi:10.1128/jb.173.19.6058-6065.1991. PMC 208352. PMID 1917840.
  3. ^ Crouzet J, Cameron B, Blanche F, Thibaut D, Debussche L, Couder M (1992). "Assay, purification, and characterization of cobaltochelatase, a unique complex enzyme catalyzing cobalt insertion in hydrogenobyrinic acid a,c-diamide during coenzyme B12 biosynthesis in Pseudomonas denitrificans". J. Bacteriol. 174 (22): 7445–7451. doi:10.1128/jb.174.22.7445-7451.1992. PMC 207441. PMID 1429466.
  4. ^ Roth JR, Lawrence JG, Bobik TA (1996). "Cobalamin (coenzyme B12): synthesis and biological significance" (PDF). Annu. Rev. Microbiol. 50: 137–181. doi:10.1146/annurev.micro.50.1.137. PMID 8905078. S2CID 36290299. Archived from the original (PDF) on 2019-03-07.
  5. ^ a b c Willows RD, Al-Karadaghi S, Hansson M, Fodje MN, Hansson A, Olsen JG, Gough S (2001). "Interplay between an AAA module and an integrin I domain may regulate the function of magnesium chelatase". J. Mol. Biol. 311 (1): 111–122. doi:10.1006/jmbi.2001.4834. PMID 11469861.

Further reading

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This article incorporates text from the public domain Pfam and InterPro: IPR006538