Comparative genome analysis identifies few traits unique to the Escherichia coli ST131 H30Rx clade and extensive mosaicism at the capsule locus (Q35289728)

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English	Comparative genome analysis identifies few traits unique to the Escherichia coli ST131 H30Rx clade and extensive mosaicism at the capsule locus	scientific article

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scholarly article

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Europe PubMed Central

PubMed publication ID

7 August 2017

Comparative genome analysis identifies few traits unique to the Escherichia coli ST131 H30Rx clade and extensive mosaicism at the capsule locus (English)

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Europe PubMed Central

PubMed publication ID

7 August 2017

Escherichia coli

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based on heuristic

inferred from title

Flemming Scheutz

2

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25269819%20AND%20SRC:MED&resulttype=core&format=json

4 June 2020

3

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4 June 2020

4

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4 June 2020

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Abdulaziz Alqasim

1

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4 June 2020

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30 September 2014

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7 August 2017

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4 June 2020

15

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4 June 2020

830

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4 June 2020

The large-scale blast score ratio (LS-BSR) pipeline: a method to rapidly compare genetic content between bacterial genomes

1 reference

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27 July 2018

Prokka: rapid prokaryotic genome annotation

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Dense genomic sampling identifies highways of pneumococcal recombination

1 reference

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27 July 2018

The epidemic of extended-spectrum-β-lactamase-producing Escherichia coli ST131 is driven by a single highly pathogenic subclone, H30-Rx

1 reference

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27 July 2018

Population genomics of post-vaccine changes in pneumococcal epidemiology.

1 reference

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Genomic analysis of extra-intestinal pathogenic Escherichia coli urosepsis.

1 reference

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Prevalence and characteristics of the epidemic multiresistant Escherichia coli ST131 clonal group among extended-spectrum beta-lactamase-producing E. coli isolates in Copenhagen, Denmark

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Abrupt emergence of a single dominant multidrug-resistant strain of Escherichia coli

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A post-assembly genome-improvement toolkit (PAGIT) to obtain annotated genomes from contigs

1 reference

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27 July 2018

Insights into a multidrug resistant Escherichia coli pathogen of the globally disseminated ST131 lineage: genome analysis and virulence mechanisms

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4192283

27 July 2018

Molecular epidemiology of extraintestinal pathogenic Escherichia coli isolates from a regional cohort of elderly patients highlights the prevalence of ST131 strains with increased antimicrobial resistance in both community and hospital care settings

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4192283

27 July 2018

Genome of multidrug-resistant uropathogenic Escherichia coli strain NA114 from India

1 reference

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27 July 2018

Genomic comparison of multi-drug resistant invasive and colonizing Acinetobacter baumannii isolated from diverse human body sites reveals genomic plasticity

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4192283

27 July 2018

Easyfig: a genome comparison visualizer

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4192283

27 July 2018

Mugsy: fast multiple alignment of closely related whole genomes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4192283

27 July 2018

Escherichia coli O25b-ST131: a pandemic, multiresistant, community-associated strain

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4192283

27 July 2018

Increased human pathogenic potential of Escherichia coli from polymicrobial urinary tract infections in comparison to isolates from monomicrobial culture samples.

1 reference

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27 July 2018

Genomics. Genome project standards in a new era of sequencing

1 reference

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27 July 2018

Yersinia enterocolitica isolates of differing biotypes from humans and animals are adherent, invasive and persist in macrophages, but differ in cytokine secretion profiles in vitro

1 reference

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27 July 2018

RAxML-III: a fast program for maximum likelihood-based inference of large phylogenetic trees

1 reference

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27 July 2018

Global dissemination of a multidrug resistant Escherichia coli clone

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4192283

26 September 2018

Phenotypic microarrays suggest Escherichia coli ST131 is not a metabolically distinct lineage of extra-intestinal pathogenic E. coli

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4192283

26 September 2018

Complete Genome Sequence of the Epidemic and Highly Virulent CTX-M-15-Producing H30-Rx Subclone of Escherichia coli ST131.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4192283

26 September 2018

The serum resistome of a globally disseminated multidrug resistant uropathogenic Escherichia coli clone.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4192283

26 September 2018

Multidrug-resistant Escherichia coli bacteremia

1 reference

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26 September 2018

The evolutionary path to extraintestinal pathogenic, drug-resistant Escherichia coli is marked by drastic reduction in detectable recombination within the core genome

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4192283

26 September 2018

Genomic analysis uncovers a phenotypically diverse but genetically homogeneous Escherichia coli ST131 clone circulating in unrelated urinary tract infections.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4192283

26 September 2018

Detection of the Escherichia coli group 2 polysaccharide capsule synthesis Gene kpsM by a rapid and specific PCR-based assay

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4192283

26 September 2018

Identifiers

10.1186/1471-2164-15-830

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Europe PubMed Central

PMC publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25269819%20AND%20SRC:MED&resulttype=core&format=json

4 June 2020

PMC publication ID

1 reference

Europe PubMed Central

PMC publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25269819%20AND%20SRC:MED&resulttype=core&format=json

4 June 2020

PubMed publication ID

1 reference

Europe PubMed Central

PMC publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25269819%20AND%20SRC:MED&resulttype=core&format=json

4 June 2020

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